Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 473836 |
Family | GH35 |
Protein Properties | Length: 733 Molecular Weight: 81559.8 Isoelectric Point: 8.4673 |
Chromosome | Chromosome/Scaffold: 1 Start: 23030632 End: 23034478 |
Description | beta-galactosidase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 341 | 0 |
VINGHRRILLSGSIHYPRSTPEMWEDLIKKAKDGGLDVIDTYVFWNGHEPSPGTYNFEGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEWNFGGFPVWLKY VDGISFRTDNGPFKAAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENEFEPELKGLGPAGHSYVNWAAKMAVGLNTGVPWVMCKEDDAPDPIINSCNGF YCDYFTPNKPYKPTMWTEAWSGWFTEFGGTIPKRPVEDLAFGVARFIQKGGSYINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLVQEPKYSHLKQ LHQ |
Full Sequence |
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Protein Sequence Length: 733 Download |
MGTTILVLSK ILTFLLTTML IGSSMIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE 60 MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD LVRFIKTIQE VGLYVHLRIG 120 PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKAAMQGFTE KIVQMMKEHR FFASQGGPII 180 LSQIENEFEP ELKGLGPAGH SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINSCNGFYC 240 DYFTPNKPYK PTMWTEAWSG WFTEFGGTIP KRPVEDLAFG VARFIQKGGS YINYYMYHGG 300 TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL 360 GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL PAWSISILPD CRNVVFNTAT 420 VAAKTSHVQM MPSGSILYSV ARYDEDIATY GDRGTITARG LLEQVNVTRD TTDYLWYTTS 480 VDIKASESFL RGGKWPTLTV DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA 540 NRIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGEAMKL 600 VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG 660 RYWMAFAKGN CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP RSWLKPRGNL LVLFEELGGD 720 ISKVSVVKRS VN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13364 | BetaGal_dom4_5 | 0.006 | 472 | 518 | 47 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
pfam02449 | Glyco_hydro_42 | 1.0e-6 | 53 | 188 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-20 | 31 | 334 | 360 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 6.0e-163 | 37 | 343 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 11 | 720 | 713 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24206.1 | 0 | 1 | 732 | 1 | 732 | At1g45130/F27F5_20 [Arabidopsis thaliana] |
EMBL | CAB64741.1 | 0 | 1 | 732 | 1 | 732 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_175127.1 | 0 | 1 | 732 | 1 | 732 | BGAL5 (beta-galactosidase 5); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002306893.1 | 0 | 1 | 731 | 1 | 727 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 8 | 731 | 6 | 727 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 35 | 339 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-38 | 30 | 355 | 10 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-38 | 30 | 355 | 10 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |