y
Basic Information | |
---|---|
Species | Arabidopsis lyrata |
Cazyme ID | 473890 |
Family | CE10 |
Protein Properties | Length: 315 Molecular Weight: 35623.7 Isoelectric Point: 5.4227 |
Chromosome | Chromosome/Scaffold: 1 Start: 23679448 End: 23681048 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 33 | 311 | 0 |
CPPGLDQETGVFSKDIIIEPKTGLSARIYRPFSIQTDHKLPLVLYFHGGAFLISSASFPCYHTSLNKFVNQANVIAVSVNYRLAPEHPLPTAYEDSWTAI KTIQAINEPWINDYADLDRLFLVGDSAGANISHHLAFRAKQSDQTVKIKGIGMIHPYFWGTQPIGSEVKDEARKKMVDGWWEFVCPSEKGSDDPWINPFA DGSPDLEGLGCERLMITVAEKDILNERGKIYYERLVKSKWRGKVEIMETKERDHVFHIFEPDCDEAMEMVRRLALFINE |
Full Sequence |
---|
Protein Sequence Length: 315 Download |
MESKKKQVSL ELLPWLVVHT DGTIERLAGT EVCPPGLDQE TGVFSKDIII EPKTGLSARI 60 YRPFSIQTDH KLPLVLYFHG GAFLISSASF PCYHTSLNKF VNQANVIAVS VNYRLAPEHP 120 LPTAYEDSWT AIKTIQAINE PWINDYADLD RLFLVGDSAG ANISHHLAFR AKQSDQTVKI 180 KGIGMIHPYF WGTQPIGSEV KDEARKKMVD GWWEFVCPSE KGSDDPWINP FADGSPDLEG 240 LGCERLMITV AEKDILNERG KIYYERLVKS KWRGKVEIME TKERDHVFHI FEPDCDEAME 300 MVRRLALFIN EVEA* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 6.0e-7 | 55 | 118 | 64 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 2.0e-8 | 60 | 117 | 58 | + Carboxylesterase family. | ||
cd00312 | Esterase_lipase | 1.0e-9 | 60 | 167 | 123 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG0657 | Aes | 2.0e-28 | 54 | 311 | 263 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 4.0e-55 | 75 | 290 | 220 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61103.1 | 0 | 1 | 314 | 1 | 314 | unknown [Arabidopsis thaliana] |
GenBank | ABB89003.1 | 0 | 3 | 311 | 4 | 315 | CXE carboxylesterase [Malus pumila] |
RefSeq | NP_564507.1 | 0 | 1 | 314 | 1 | 314 | hydrolase [Arabidopsis thaliana] |
RefSeq | XP_002327124.1 | 0 | 4 | 312 | 3 | 319 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510251.1 | 0 | 3 | 311 | 2 | 311 | Gibberellin receptor GID1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 4e-37 | 16 | 310 | 32 | 348 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ed1_E | 4e-37 | 16 | 310 | 32 | 348 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ed1_D | 4e-37 | 16 | 310 | 32 | 348 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ed1_C | 4e-37 | 16 | 310 | 32 | 348 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ed1_B | 4e-37 | 16 | 310 | 32 | 348 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EW737450 | 246 | 70 | 315 | 0 |
EE539191 | 248 | 1 | 248 | 0 |
FD945520 | 228 | 88 | 315 | 0 |
FD949941 | 253 | 1 | 253 | 0 |
ES789964 | 312 | 3 | 311 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|