Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 474430 |
Family | GT14 |
Protein Properties | Length: 407 Molecular Weight: 46074.3 Isoelectric Point: 9.6798 |
Chromosome | Chromosome/Scaffold: 1 Start: 28290942 End: 28292633 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 64 | 319 | 0 |
FAYLVSGSKGDLESLWRTLRALYHPRNQYIVHLDLESPVDERSELASRIKNDPMYSNIGNVYMIAKANLVTYTGPTMVANTLHACAILLKRTPDWDWFIN LSASDYPLVTQDDLIHTFSTLDRNLNFIDHTSRLGWKNKKRAMPLIIDPGLYMVNKSNVLWVRPNRSLPAAFKLFTGSAWMALSHSFVEYIIWGWDNLPR TLLMYYTNFVSSPEGYFHTVICNVPEFSKTAVNHDLHYIAWDKPPRQHPRMLSLRD |
Full Sequence |
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Protein Sequence Length: 407 Download |
MEKKCVFSLV ITSLVCVVLI ATSFNIGLIS SLRPPVNGTL SRYAKNDSKV VAQQPLEVDK 60 LPRFAYLVSG SKGDLESLWR TLRALYHPRN QYIVHLDLES PVDERSELAS RIKNDPMYSN 120 IGNVYMIAKA NLVTYTGPTM VANTLHACAI LLKRTPDWDW FINLSASDYP LVTQDDLIHT 180 FSTLDRNLNF IDHTSRLGWK NKKRAMPLII DPGLYMVNKS NVLWVRPNRS LPAAFKLFTG 240 SAWMALSHSF VEYIIWGWDN LPRTLLMYYT NFVSSPEGYF HTVICNVPEF SKTAVNHDLH 300 YIAWDKPPRQ HPRMLSLRDM GNMIASRSAF GRKFRRNDTV LDKIDKQLLR RMNEDGFTPG 360 GWCGGKPECS VVEDVARIRP SSGAVRLKGL VDMLVTEAKS GKNQCV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-90 | 64 | 324 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 1 | 406 | 417 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF87858.1 | 0 | 1 | 406 | 1 | 406 | AC022520_2 Hypothetical protein [Arabidopsis thaliana] |
GenBank | AAK83637.1 | 0 | 1 | 405 | 6 | 423 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
RefSeq | NP_175718.2 | 0 | 1 | 406 | 20 | 423 | acetylglucosaminyltransferase [Arabidopsis thaliana] |
RefSeq | NP_566506.1 | 0 | 1 | 405 | 6 | 423 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002533550.1 | 0 | 1 | 405 | 6 | 416 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000000005 | 75 | 289 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000000005 | 75 | 289 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000000005 | 75 | 289 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000000005 | 75 | 289 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000002 | 75 | 289 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |