| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 474617 |
| Family | AA1 |
| Protein Properties | Length: 550 Molecular Weight: 61643.3 Isoelectric Point: 9.3272 |
| Chromosome | Chromosome/Scaffold: 1 Start: 29375901 End: 29378247 |
| Description | SKU5 similar 14 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 32 | 501 | 0 |
| VTYGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVINVFNHLDEPFLLTWSGIQHRKNCWQDGVAGTSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLH RFAGGFGGLRVNSRLLIPVPYADPEDDYTVLLGDWYTAGHTALKNFLDSGRTLGLPNGVLINGKSGKVGGKNEPLFTMKPGKTYKYRLCNVGFKSTLNFR IQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTADQAAKDYYMVASTRFLKKELSTVGVIRYEGSNVQASAELPKAPIGWAWSLNQFRSFRWNLTA SAARPNPQGSYHYGKINITRSIKLVNSKSVVDGKVRFGFNGVSHVDTETPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFE NHEKSMQSFHLDGYSFFAVASEPGRWTPEKRKNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 550 Download |
| MEGRLLTVLV CLVSTVAIVN AGDPYFFYTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS 60 TSNNNVVINV FNHLDEPFLL TWSGIQHRKN CWQDGVAGTS CPIPAGQNFT YHFQPKDQIG 120 SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTAG HTALKNFLDS 180 GRTLGLPNGV LINGKSGKVG GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV 240 EMEGSHVLQN DYDSLDVHVG QCFSVLVTAD QAAKDYYMVA STRFLKKELS TVGVIRYEGS 300 NVQASAELPK APIGWAWSLN QFRSFRWNLT ASAARPNPQG SYHYGKINIT RSIKLVNSKS 360 VVDGKVRFGF NGVSHVDTET PLKLAEYFQM SEKVFKYNVI KDEPAAKITA LTVQPNVLNI 420 TFRTFVEIIF ENHEKSMQSF HLDGYSFFAV ASEPGRWTPE KRKNYNLLDA VSRHTVQVYP 480 KSWSAILLTF DNAGMWNIRS ENLERRYLGE QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK 540 GLPLPAHYS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 17 | 549 | 533 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 18 | 537 | 521 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 17 | 541 | 525 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 19 | 537 | 522 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 24 | 540 | 529 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10639.1 | 0 | 1 | 549 | 1 | 558 | putative pollen specific protein [Arabidopsis thaliana] |
| EMBL | CAA47176.1 | 0 | 18 | 547 | 20 | 549 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 4 | 543 | 6 | 547 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_187948.1 | 0 | 3 | 549 | 4 | 550 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_564697.1 | 0 | 1 | 549 | 1 | 549 | sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 509 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asq_A | 0 | 28 | 509 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asp_B | 0 | 28 | 509 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asp_A | 0 | 28 | 509 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1aso_B | 0 | 28 | 509 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
