y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 476193 |
Family | GT77 |
Protein Properties | Length: 538 Molecular Weight: 61804.9 Isoelectric Point: 8.7553 |
Chromosome | Chromosome/Scaffold: 2 Start: 14535411 End: 14538177 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 300 | 520 | 0 |
VPNFLVCALDDETYQFSILQGLPVFFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWFRNPLPLLQSFGPSVLTAQSDEYN TTVPINRPRRLNSGFYFAHSDDPTIAAMEKVVKHAATSGLSEQPSFYDTLCGEGGIYRVGDDKCLEPETNLTVHFLDRELFPNGAYGDLWLKEDVRGECE KKHCFVLHNNWISGRLKKLER |
Full Sequence |
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Protein Sequence Length: 538 Download |
MLARSEAYQS DIAVLMDPET VLLPNFISAL SYAHQLDRDW LLVSSSVGIP RFPFHWDETR 60 HFWRQDNGKR VRFGELQKMI SLRSWQSNSS EGKMIMAWNN INMPLHCGVL PPFLYQRGTH 120 NQWIINEAMS CKRRFVFDAT STISSFFLGN AENIDNRSDN VSEPNTRNWE YIGNSRLGQL 180 YGSLFSRSYT LPKLLKCNKR YMFVSASDRS TDLSIPKGKS LGFRTREKIS ACISRTKLRS 240 LKLDFVQKDE AVPPLKFPFD LESLLPLVAD KNKTVVLSIA GYSYKDMLMS WVCRLRRLKV 300 PNFLVCALDD ETYQFSILQG LPVFFDPYAP KNISFNDCHF GSKCFQRVTK VKSRTVLKIL 360 KLGYNVLLSD VDVYWFRNPL PLLQSFGPSV LTAQSDEYNT TVPINRPRRL NSGFYFAHSD 420 DPTIAAMEKV VKHAATSGLS EQPSFYDTLC GEGGIYRVGD DKCLEPETNL TVHFLDRELF 480 PNGAYGDLWL KEDVRGECEK KHCFVLHNNW ISGRLKKLER QMMEGLWEYD ASIRMCV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 6.0e-52 | 298 | 521 | 225 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Gene Ontology | |
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GO Term | Description |
GO:0005783 | endoplasmic reticulum |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52325.1 | 0 | 1 | 537 | 1 | 535 | AC011663_4 hypothetical protein; 72471-70598 [Arabidopsis thaliana] |
EMBL | CAN65937.1 | 0 | 1 | 537 | 1 | 534 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_177220.2 | 0 | 1 | 537 | 1 | 537 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002271910.1 | 0 | 1 | 537 | 1 | 551 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312675.1 | 0 | 1 | 537 | 1 | 550 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX136452 | 306 | 185 | 489 | 0 |
EX136364 | 306 | 131 | 435 | 0 |
EL342448 | 250 | 288 | 537 | 0 |
FD583738 | 196 | 343 | 538 | 0 |
DK548123 | 189 | 350 | 538 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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