| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 476726 |
| Family | AA1 |
| Protein Properties | Length: 546 Molecular Weight: 61749.5 Isoelectric Point: 6.6525 |
| Chromosome | Chromosome/Scaffold: 2 Start: 16880390 End: 16882853 |
| Description | SKU5 similar 18 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 42 | 500 | 0 |
| GGNKQVIVINDMFPGPMLNATANDVIIVNIFNNLHEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAI RIYTPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDTGHSLPKPDGILFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGT YVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIYATARFTDFYLGGRALIRYPNSPLDPVGPVPLAPASWDYSSSVEQALSIRMDLNVGAARSNPQ GSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPDTPLKLVDHFQLNDTIIPDMFPVYPSNKTPSLGTSVVDIHYKDFVHIVFQNPLFELESYHI DGYNFFVVGYGFGAWSESKRAGYNLVDAVSRSTIQVYPYSWAAILIAMDNQGMWNVRSQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 546 Download |
| MRHVFVEVVV LISLVILELS YAFAPIVSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPMLN 60 ATANDVIIVN IFNNLHEPFL MTWNGLQLRK NSWQDGVRGT NCPILPGTNW TYRFQVKDQI 120 GSYFYFPSLL LQKAAGGYGA IRIYTPELVP VPFPKPDEEY DILIGDWFYA DHTVMRASLD 180 TGHSLPKPDG ILFNGRGPEE TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG 240 TYVQKRVYSS LDIHVGQSYS VLVTAKTDPV GIYRSYYIYA TARFTDFYLG GRALIRYPNS 300 PLDPVGPVPL APASWDYSSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND 360 VMLSSGKLRY TINGVSFVYP DTPLKLVDHF QLNDTIIPDM FPVYPSNKTP SLGTSVVDIH 420 YKDFVHIVFQ NPLFELESYH IDGYNFFVVG YGFGAWSESK RAGYNLVDAV SRSTIQVYPY 480 SWAAILIAMD NQGMWNVRSQ KAEQWYLGQE LYMRVKGEGQ EDPSNIPVRD ENPIPGNVIR 540 CGKVL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 2.0e-169 | 25 | 543 | 519 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 2.0e-172 | 29 | 543 | 518 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 1 | 545 | 545 | + copper ion binding / pectinesterase | ||
| PLN02354 | PLN02354 | 0 | 25 | 544 | 530 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 25 | 545 | 521 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 529 | 3 | 534 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Ser |
| PDB | 1asq_A | 0 | 26 | 529 | 3 | 534 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Ser |
| PDB | 1asp_B | 0 | 26 | 529 | 3 | 534 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Ser |
| PDB | 1asp_A | 0 | 26 | 529 | 3 | 534 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Ser |
| PDB | 1aso_B | 0 | 26 | 529 | 3 | 534 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Ser |
