CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID477043
FamilyGT4
Protein PropertiesLength: 406 Molecular Weight: 45312.2 Isoelectric Point: 7.515
ChromosomeChromosome/Scaffold: 2 Start: 18353765 End: 18356111
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42123713.09967e-42
  FLSINRFERKKNIDLAVSAFAMLCKHKQNLSDVTLTVAGKCGYDERLKENVEYLEELRSLAEKEGVFDRVNFITSCSTAERNELLSSCLCVLYTPTDEHF
  GIVPLEAMAAYKPVIACNSGGPVETVKNGVTGYLCEPTPEDFSSAMARFIENPELANRMG
Full Sequence
Protein Sequence     Length: 406     Download
MGKKEGSKMN IAIIHPDLGI GGAERLIVDA AVELASHGHK VHVFTSHHDK SRCFEETLSG    60
IFRVTVYGSF LPRHIFYRLH AVCAYLRCLF VALCVLLGWS SFDVILADQV SVVVPLLKLK    120
RSSKVVFYCH FPDLLLAKHT TALRRMYRKP IDFIEEQTTG MADMILVNSN FTASTFASTF    180
KRLNAQGNRP AVLYPAVNID QFNESHTYKL NFLSINRFER KKNIDLAVSA FAMLCKHKQN    240
LSDVTLTVAG KCGYDERLKE NVEYLEELRS LAEKEGVFDR VNFITSCSTA ERNELLSSCL    300
CVLYTPTDEH FGIVPLEAMA AYKPVIACNS GGPVETVKNG VTGYLCEPTP EDFSSAMARF    360
IENPELANRM GAEARNHVVE SFSVKTFGQK LNQYLVDVVS SPKED* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03804GT1_wbaZ_like1.0e-3611391396+
cd03798GT1_wlbH_like3.0e-4011391401+
COG0438RfaG1.0e-438400402+
cd03801GT1_YqgM_like9.0e-5410391397+
cd03805GT1_ALG2_like09391396+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAC83030.1014051405Similar to gene pi010 glycosyltransferase gi
GenBankAAM26674.1014051403At1g78800/F9K20_16 [Arabidopsis thaliana]
GenBankACU21459.1014051407unknown [Glycine max]
RefSeqNP_178001.2014051403glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002525620.1014051408alpha-1,3-mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A3e-1721236526164A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB3c48_B0.00000000002640518432A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c48_A0.00000000002640518432A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_B0.00000000022140522412A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_A0.00000000022140522412A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
Transmembrane Domains
StartEnd
85107
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EG522343295803740
EG52234227512750
CK27432531463130
EL44718731213120
EG522342322723030.00001
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Brassica rapaBra035064
Carica papayaevm.model.supercontig_77.17
Capsella rubellaCarubv10022022m
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Medicago truncatulaMedtr1g104880.1
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00056995mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi013830mSi010219m
Selaginella moellendorffii419620
Sorghum bicolorSb06g026860.1
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny