| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 478409 |
| Family | GH51 |
| Protein Properties | Length: 677 Molecular Weight: 74816.3 Isoelectric Point: 5.3065 |
| Chromosome | Chromosome/Scaffold: 3 Start: 4304991 End: 4309417 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 214 | 665 | 0 |
| SARLQLTTTKKGSIWIDQVSAMPVDTYKGHGFRNDLFQMMVDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPGHFGDVWKYWTDDGLGHFEFFQ MAEDIGAAPIWVFNNGISHNDEVETASIMPFVQEALDGIEFARGDANSTWGSVRAKMGRQEPFELKYVAIGNEDCGKTYYRGNYIVFYNAIKKAYPDIKI ISNCDGSSHPLDHPADYYDYHIYTSASNLFSMYHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLASLAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRW NPDAIVFNSSHLYGTPSYWVQRFFAESSGATLLTSTLKGNSTSLVASAISWENNGKDYIRIKAVNFGANSVNMKVLVTGLDPNVMRVTGSKKTVLTSTNV MDENSFSQPEKVVPHESLLEMAEEDMTVVLPPHSFSSFDLLKESAKIKMPIS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 677 Download |
| MESWKLLRSV CLLSFLLGSC FVYQSLRVVD AQEDPKPAVT LQVDASNGAG RPIPDTLFGI 60 FFEEINHAGA GGLWAELVSN RGFEAGGQNT PSNIWPWSIV GDHSSIYVAT DRSSCFERNK 120 IALRMDVLCD SKDCPSGGVG VYNPGYWGMN IEEGKKYKVA LYVRSTGDID VSVSLTSSNG 180 SLTLASEKII ASASDVSKWI KKEVLLEAKS TDPSARLQLT TTKKGSIWID QVSAMPVDTY 240 KGHGFRNDLF QMMVDIKPRF IRFPGGCFVE GEWLSNAFRW KETVGPWEER PGHFGDVWKY 300 WTDDGLGHFE FFQMAEDIGA APIWVFNNGI SHNDEVETAS IMPFVQEALD GIEFARGDAN 360 STWGSVRAKM GRQEPFELKY VAIGNEDCGK TYYRGNYIVF YNAIKKAYPD IKIISNCDGS 420 SHPLDHPADY YDYHIYTSAS NLFSMYHQFD RTSRSGPKAF VSEYAVTGKD AGTGSLLASL 480 AEAAFLIGLE KNSDIVEMAS YAPLFVNTND RRWNPDAIVF NSSHLYGTPS YWVQRFFAES 540 SGATLLTSTL KGNSTSLVAS AISWENNGKD YIRIKAVNFG ANSVNMKVLV TGLDPNVMRV 600 TGSKKTVLTS TNVMDENSFS QPEKVVPHES LLEMAEEDMT VVLPPHSFSS FDLLKESAKI 660 KMPISDSSSH QKTTTV* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.0005 | 491 | 649 | 178 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 4.0e-30 | 244 | 389 | 146 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-39 | 487 | 647 | 171 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 7.0e-48 | 462 | 647 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK50089.1 | 0 | 1 | 676 | 3 | 678 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
| GenBank | AAO92261.1 | 0 | 1 | 676 | 3 | 678 | alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| RefSeq | NP_187685.1 | 0 | 1 | 676 | 3 | 678 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_197984.2 | 0 | 3 | 676 | 6 | 674 | ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] |
| RefSeq | XP_002523672.1 | 0 | 34 | 670 | 35 | 675 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 4e-17 | 244 | 651 | 48 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 4e-17 | 244 | 651 | 48 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 4e-17 | 244 | 651 | 48 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 4e-17 | 244 | 651 | 48 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 4e-17 | 244 | 651 | 48 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
