Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 478847 |
Family | CE8 |
Protein Properties | Length: 591 Molecular Weight: 64024.6 Isoelectric Point: 9.1107 |
Chromosome | Chromosome/Scaffold: 3 Start: 5973123 End: 5976279 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 280 | 574 | 0 |
ATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAG PSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFIKCIIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGA TSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYANTGAGAGTANRVKWGGFKVITAAAEAQKYTAGQFIG |
Full Sequence |
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Protein Sequence Length: 591 Download |
MAPSMKEIFS NNFKKNKKLV LLSSAVALLL VAAVAGFSAG ASKSNEKRTL SPSSHAVLRS 60 SCSSTRYPEL CISAVANTGG VEITSQKDVI EASLNLTIIA VEHNYFNVKK LIKKRKGLTP 120 REKTALHDCL ETIDETLDEL HETVEDLHLY PARKTLREHA GDLKTLISSA ITNQETCLDG 180 FSHDDADKQV RKALLKGQIH VEHMCSNALA MIKNMTDTDI ANFEQKAKIT SNNRKLKEEN 240 QETTVADIAG AGELDAEGWP TWLSAGDRRL LQGSSVKADA TVAADGSGTF KTVAAAVAAA 300 PENSNKRYVI HIKAGVYREN VEVAKKKKNI MFMGDGRTRT IITGSRNVVD GSTTFHSATV 360 AAVGERFLAR DITFQNTAGP SKHQAVALRV GSDFSAFYNC DMLAYQDTLY VHSNRQFFIK 420 CIIAGTVDFI FGNAAVVLQD CDIHARRPNS GQKNMVTAQG RTDPNQNTGI VIQKCRIGAT 480 SDLQSVKGSF PTYLGRPWKE YSQTVIMQSA ISDVIRPEGW SEWTGTFALN TLTYREYANT 540 GAGAGTANRV KWGGFKVITA AAEAQKYTAG QFIGGGGWLS STGFPFSLGL * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 3.0e-157 | 43 | 590 | 562 | + pectinesterase | ||
PLN02484 | PLN02484 | 2.0e-174 | 43 | 590 | 552 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 43 | 590 | 555 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 279 | 575 | 297 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 49 | 590 | 546 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC50023.1 | 0 | 42 | 590 | 41 | 582 | ATPME2 precursor [Arabidopsis thaliana] |
GenBank | AAC72288.1 | 0 | 1 | 590 | 1 | 592 | putative pectin methylesterase [Arabidopsis thaliana] |
EMBL | CAB95025.1 | 0 | 48 | 590 | 52 | 579 | pectin methylesterase [Nicotiana tabacum] |
RefSeq | NP_175786.1 | 0 | 1 | 590 | 1 | 587 | ATPME2; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188048.1 | 0 | 1 | 590 | 1 | 592 | ATPME3; pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 272 | 590 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 276 | 590 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-24 | 283 | 574 | 12 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-24 | 283 | 574 | 12 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-24 | 283 | 544 | 12 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |