y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 478965 |
Family | GT14 |
Protein Properties | Length: 425 Molecular Weight: 48337.6 Isoelectric Point: 9.3493 |
Chromosome | Chromosome/Scaffold: 3 Start: 6410285 End: 6413318 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 81 | 336 | 0 |
FAYLVSGSKGDVEKLWRTLRAVYHPRNQYVVHLDLESPVDERLELASRINNDPMYSETGNVYMITKANLVTYKGPTMVANTLHACAVLLKRSANWDWFIN LSASDYPLVTQDDLLHTFSTLDRNLNFIEHTSQLGWKEEKRAQPLMIDPGLYLLNKSDIYWVTPRRSLPTAFKLFTGSAWMALSRPFVEYCIWGWDNLPR TLLMYYTNFVSSPEGYFQTVICNVPEFAKTAVNHDLHYISWDNPPQQHPHVLSLND |
Full Sequence |
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Protein Sequence Length: 425 Download |
MGYVNVEKRW VFPLVITSLV CVFLLATSFN MGLVSSLRTI NGIFSIIPSR LVKNQTRLDF 60 AESKVARQTR VSPHEDKLPH FAYLVSGSKG DVEKLWRTLR AVYHPRNQYV VHLDLESPVD 120 ERLELASRIN NDPMYSETGN VYMITKANLV TYKGPTMVAN TLHACAVLLK RSANWDWFIN 180 LSASDYPLVT QDDLLHTFST LDRNLNFIEH TSQLGWKEEK RAQPLMIDPG LYLLNKSDIY 240 WVTPRRSLPT AFKLFTGSAW MALSRPFVEY CIWGWDNLPR TLLMYYTNFV SSPEGYFQTV 300 ICNVPEFAKT AVNHDLHYIS WDNPPQQHPH VLSLNDTMQM ISSGAAFARK FRRDDRVLDL 360 IDKELLRRRN GKDSFTPGGW CSGKPKCSKV GDVAKINPSV GAQRLQGLVN RLVNEAITGV 420 SQCK* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-87 | 81 | 341 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 1 | 424 | 424 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK83637.1 | 0 | 1 | 424 | 1 | 424 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
RefSeq | NP_566506.1 | 0 | 1 | 424 | 1 | 424 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002317501.1 | 0 | 1 | 424 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329084.1 | 0 | 1 | 424 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533550.1 | 0 | 1 | 424 | 1 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000000004 | 92 | 368 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000000004 | 92 | 368 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000000004 | 92 | 368 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000000004 | 92 | 368 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000000001 | 92 | 368 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |