| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 479372 |
| Family | GT8 |
| Protein Properties | Length: 660 Molecular Weight: 76097.8 Isoelectric Point: 7.9828 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8005824 End: 8009055 |
| Description | plant glycogenin-like starch initiation protein 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 325 | 534 | 2.89999e-41 |
| ATILHSAHVYVCGAIAAAQSIRQSGSTRDLVILVDDNISGYHRSGLEAAGWQIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN IDFLFSMPEISATGNNGTLFNSGVMVIEPCNCTFQLLMEHINEIESYNGGDQGYLNEVFTWWHRIPKHMNFLKHFWVGDEDDVRRKKTELFGAEPPVLYV LHYLGMKPWL | |||
| Full Sequence |
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| Protein Sequence Length: 660 Download |
| MANSPAAPAA TATTGGDSRR RLSASIEAIC KRRFRRNSKG SGRSDMLKPF SIINFPTQDK 60 NTSCCCCSKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS HSSSRWIWRR QDPRYVSDLD 120 INWDDVTKTL ESIEEGRTIG VLNFDSNEIQ RWREVSKSND NKDEENVVVL NLDYADKNVT 180 WDALYPEWID EEQETEVPVC PNLPKIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA 240 AATVAASAKG LFRGHVLFVS RCFPIPNLFR CTDLVSRRGD VWLYKPNLDT LRDKLQLPVG 300 SCELSLPLGI KERPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD 360 NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK FRLWQLTDYD KIIFIDADLL 420 ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN 480 EVFTWWHRIP KHMNFLKHFW VGDEDDVRRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD 540 CNFNSDIFVE FATDIAHRKW WMVHDAMPEE LHQFCYLRSK QKAQLEYDRR QAEAANYADG 600 HWKIRIKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITAAR RSSLPGHNL* 660 720 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00505 | Glyco_transf_8 | 4.0e-12 | 327 | 533 | 245 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
| cd06914 | GT8_GNT1 | 3.0e-15 | 334 | 484 | 164 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
| PLN00176 | PLN00176 | 7.0e-16 | 303 | 432 | 133 | + galactinol synthase | ||
| pfam01501 | Glyco_transf_8 | 4.0e-43 | 325 | 536 | 256 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 4.0e-72 | 322 | 567 | 256 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2x_B | 1e-21 | 322 | 533 | 5 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u2x_A | 1e-21 | 322 | 533 | 5 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u2v_B | 1e-21 | 322 | 533 | 5 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u2v_A | 1e-21 | 322 | 533 | 5 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u2u_B | 1e-21 | 322 | 533 | 5 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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