Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 479855 |
Family | AA3 |
Protein Properties | Length: 744 Molecular Weight: 80982.7 Isoelectric Point: 6.8188 |
Chromosome | Chromosome/Scaffold: 3 Start: 10744116 End: 10747900 |
Description | fatty alcohol oxidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 225 | 737 | 6.50202e-43 |
HDAIRIKCDAVVVGSGSGGGVAASVLAKSGLKVVVLEKGSYFTPSDYRPFEGPGLDKLYENGGILPSVDGNLMVLAGATVGGGSAVNWSACIKTPKSVLQ EWSEDQNIPLFATKEYVSAMEVVWERMGVTDKCEMESFQNQVLRKGCQNLGVNVENVPRNSSESHYCGSCGYGCIQGDKKGSDRTWLVDAVSQGAVILTG CKAERFILEKNSGNEGGKKMKCLGVMAKSLNGNIAKTLKIEAKVTVSAGGALLTPPLMISSGLRNRHIGKNLHLHPVLMAWGYFPMKESSNFKGKSYEGG IITSVSKVLSEDSEVRAIIETPALGPGSFSVLCPWTSGLDMKKRMARYSRTASLITIVRDRGSGEVKTEGRISYAVDKTDRDNLKAGLRQSLKILIAAGA EEVGTHRSDGQRLICKGSDENSIEEFLDSVSTEEGPKGMTEKWNVYSSAHQMGSCRIGENEKEGAIDLNGESWEAEKLFVCDASALPSAVGVNPMITVMS TAYCISTRIAKSM |
Full Sequence |
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Protein Sequence Length: 744 Download |
MGKYKVAGKF GLRDITEAEM ESLASFCEAV LPPVLPPEEV SSEGDNHRNK EALRSFYSTS 60 GSQTPVLRQS IELITKRGTI EAYLATRLIL FLLATRLGTL LICGTECLVS RWPFVEKFSE 120 LSLEKRERVL QKQFRNWFLT PIRAAFVYIK VAFLFCFFSR VTPDGENPAW EAIGYHVNLD 180 ENKPSETRKE RPLEKGIVET MEETEQTLLE LLAQKGLEAD LDTVHDAIRI KCDAVVVGSG 240 SGGGVAASVL AKSGLKVVVL EKGSYFTPSD YRPFEGPGLD KLYENGGILP SVDGNLMVLA 300 GATVGGGSAV NWSACIKTPK SVLQEWSEDQ NIPLFATKEY VSAMEVVWER MGVTDKCEME 360 SFQNQVLRKG CQNLGVNVEN VPRNSSESHY CGSCGYGCIQ GDKKGSDRTW LVDAVSQGAV 420 ILTGCKAERF ILEKNSGNEG GKKMKCLGVM AKSLNGNIAK TLKIEAKVTV SAGGALLTPP 480 LMISSGLRNR HIGKNLHLHP VLMAWGYFPM KESSNFKGKS YEGGIITSVS KVLSEDSEVR 540 AIIETPALGP GSFSVLCPWT SGLDMKKRMA RYSRTASLIT IVRDRGSGEV KTEGRISYAV 600 DKTDRDNLKA GLRQSLKILI AAGAEEVGTH RSDGQRLICK GSDENSIEEF LDSVSTEEGP 660 KGMTEKWNVY SSAHQMGSCR IGENEKEGAI DLNGESWEAE KLFVCDASAL PSAVGVNPMI 720 TVMSTAYCIS TRIAKSMTAG LSH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05199 | GMC_oxred_C | 3.0e-20 | 595 | 729 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 7.0e-22 | 250 | 735 | 546 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam00732 | GMC_oxred_N | 1.0e-91 | 280 | 501 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC87643.1 | 0 | 69 | 743 | 2 | 678 | alcohol oxidase [Arabidopsis thaliana] |
EMBL | CAN71289.1 | 0 | 15 | 737 | 22 | 735 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_566729.1 | 0 | 1 | 743 | 1 | 746 | alcohol oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002311685.1 | 0 | 15 | 737 | 23 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314488.1 | 0 | 20 | 737 | 1 | 713 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1naa_B | 0.009 | 233 | 311 | 4 | 95 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1naa_A | 0.009 | 233 | 311 | 4 | 95 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1kdg_B | 0.01 | 233 | 311 | 9 | 100 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794753 | 624 | 111 | 734 | 0 |
HO779224 | 447 | 213 | 659 | 0 |
DK534935 | 250 | 496 | 744 | 0 |
ES815664 | 352 | 332 | 682 | 0 |
FD936762 | 241 | 507 | 744 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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