y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 479931 |
Family | GT14 |
Protein Properties | Length: 417 Molecular Weight: 46908.3 Isoelectric Point: 8.1406 |
Chromosome | Chromosome/Scaffold: 3 Start: 11464829 End: 11467267 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 68 | 321 | 0 |
IAYLISGSSGDSRRILRLLYATYHPRNRYLLHLDSLATQSERDRIAVAVQDVPIFRAARNVDVIGKPDFAYQRGSSPMASTLHGASILLRLSGAWDWFVN LSVDDYPLVTQDELLHIMSHLPKDLNFVNHTSYIGWKESRRLKPVIVDPGLYLVEKTDMFFASQKRELPKAFKLFSGPSFSILSRNFIEHCVLGTDNFPR TLLMYLSNTPDSLSNYFPTILCNSNIFKKTIINNNLLYLASNDTSKEKYHQLDH |
Full Sequence |
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Protein Sequence Length: 417 Download |
MQKGPEQPRV TLYIILTTAF LSLCFLLSLF SSSHSSSSYT GRPEDLRPDP RLFPSSSKIA 60 ADTAPPSIAY LISGSSGDSR RILRLLYATY HPRNRYLLHL DSLATQSERD RIAVAVQDVP 120 IFRAARNVDV IGKPDFAYQR GSSPMASTLH GASILLRLSG AWDWFVNLSV DDYPLVTQDE 180 LLHIMSHLPK DLNFVNHTSY IGWKESRRLK PVIVDPGLYL VEKTDMFFAS QKRELPKAFK 240 LFSGPSFSIL SRNFIEHCVL GTDNFPRTLL MYLSNTPDSL SNYFPTILCN SNIFKKTIIN 300 NNLLYLASND TSKEKYHQLD HKEFTEMVES GAAFARGFRF DDTVLDRIDH ELLGRRPGEA 360 VPGGWCLGDS GKNRSSCSVW GDSGILRPGS GSDRLERRIV ELLSNDWFRS HQCISE* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-68 | 68 | 328 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-121 | 50 | 413 | 364 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS99698.1 | 0 | 1 | 416 | 1 | 417 | At3g24040 [Arabidopsis thaliana] |
DDBJ | BAD43851.1 | 0 | 145 | 416 | 1 | 272 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_189046.1 | 0 | 1 | 416 | 1 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002299292.1 | 0 | 12 | 416 | 24 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 47 | 416 | 65 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00003 | 84 | 269 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00003 | 84 | 269 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00003 | 84 | 269 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00003 | 84 | 269 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00007 | 84 | 269 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |