Basic Information | |
---|---|
Species | Arabidopsis lyrata |
Cazyme ID | 480556 |
Family | GH35 |
Protein Properties | Length: 849 Molecular Weight: 96099.4 Isoelectric Point: 9.1085 |
Chromosome | Chromosome/Scaffold: 3 Start: 21437124 End: 21441441 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 51 | 355 | 0 |
LIINGNRELLYSGSIHYPRSTPEMWPNIIKRAKQGGLNTIQTYVFWNVHEPEQGKFNFSGRADLVKFIKLIEKNGMYVTLRLGPFIQAEWTHGGLPYWLR EVPGIFFRTDNTPFKEHTERYVKVILDKMKEEKLFASQGGPIILGQIENEYSAVQRAYKEDGLNYIKWASKLVHSMDLGIPWVMCKQNDAPDPMINACNG RHCGDTFPGPNKENKPSLWTENWTTQFRVYGDPPAQRSVEDIAYSVARFFSKNGTHVNYYMYHGGTNFGRTSAHYVTTRYYDDAPLDEYGLEREPKYGHL KHLHN |
Full Sequence |
---|
Protein Sequence Length: 849 Download |
MRIHSSDHSW LLLAILVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL 60 YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE PEQGKFNFSG RADLVKFIKL 120 IEKNGMYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NTPFKEHTER YVKVILDKMK 180 EEKLFASQGG PIILGQIENE YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA 240 PDPMINACNG RHCGDTFPGP NKENKPSLWT ENWTTQFRVY GDPPAQRSVE DIAYSVARFF 300 SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEYG LEREPKYGHL KHLHNALNLC 360 KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT ESAEKIKFKG KEYIIPHRSI 420 SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TETVPSKIKG DSYIPVELYG 480 LTKDETDYGW YTTSFKIDDN DLSKKKGSKP TLRIASLGHA LHVWLNGEYL GNGHGSHEEK 540 SFVFQKPISL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK 600 WGNKVGMEGE KLGIHAEEGL KKVKWQKFSG KEPGLTWYQT YFDAPESQSA AAIRMNGMGK 660 GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK NLLVIFEEEP NVKPELIDFV 720 IINRDTVCSH IGENYTPSVR HWTRKNDQVQ AITDDVHLTA SLKCSGTKKI SEVEFASFGN 780 PNGTCGNFTL GTCNAPVSKK VVEKYCLGKA ECVIPVNKST FQQDKKDSCP KVEKKLAVQV 840 KCGRDKKN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-9 | 72 | 201 | 149 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-19 | 762 | 842 | 85 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-20 | 46 | 201 | 162 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-149 | 50 | 357 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 46 | 842 | 826 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD24606.1 | 0 | 47 | 848 | 31 | 832 | putative beta-galactosidase [Arabidopsis thaliana] |
EMBL | CAA17766.1 | 0 | 42 | 848 | 52 | 831 | beta-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_179264.2 | 0 | 1 | 848 | 1 | 848 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_567973.1 | 0 | 42 | 848 | 39 | 845 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
Swiss-Prot | Q9SCU8 | 0 | 2 | 842 | 6 | 837 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.99931e-42 | 50 | 353 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7e-36 | 37 | 353 | 4 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7e-36 | 37 | 353 | 4 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |