Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 481501 |
Family | CE8 |
Protein Properties | Length: 543 Molecular Weight: 60098.5 Isoelectric Point: 4.7596 |
Chromosome | Chromosome/Scaffold: 4 Start: 6605316 End: 6607328 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 233 | 526 | 0 |
IVVAADGTGNFSTINEAISFAPDMSNDRVLIYVREGVYDENIEIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDMMITNTAG PEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVVTAQSRDSPDEDTGISMQNCSILA SDDLFNSSNRVKSYLGRPWREFSRTVLMESYIDEFIDGSGWSKWNGREELDTLYYGEYNNNGPGSETGKRVNWPGFHIMGYEDAFNFTTTEFIT |
Full Sequence |
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Protein Sequence Length: 543 Download |
MALSTLNFSF LFFLLFTPLV VSTSLKPNQT SLTSFCMNTP YPNACFDSLK LSISINISPN 60 ILSFLLQTLQ TALSEAGKLT DLLSGAGISN NLVEGQRGSL QDCKDLHQIT SSFLKRSISK 120 IQDGVNDSRK LADARAYLSA ALTNKITCLE GLDTASGPLK PKLVTSFMET YKHVSNSLSA 180 LPKQRRATNL KTDGKTKNRR LFGLLPDWVS KKDHRFLEDS SDGYDEYDPS EIIVVAADGT 240 GNFSTINEAI SFAPDMSNDR VLIYVREGVY DENIEIPIYK TNIVLIGDGS DVTFITGNRS 300 VGDGWTTFRS ATLAVSGEGF LARDMMITNT AGPEKHQAVA LRVNADFVAL YRCVIDGYQD 360 TLYTHSFRQF YRECDIYGTI DYIFGNAAVV FQGCNIVSKL PMPGQFTVVT AQSRDSPDED 420 TGISMQNCSI LASDDLFNSS NRVKSYLGRP WREFSRTVLM ESYIDEFIDG SGWSKWNGRE 480 ELDTLYYGEY NNNGPGSETG KRVNWPGFHI MGYEDAFNFT TTEFITGDGW LGSTSFPYDN 540 GI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 3.0e-152 | 99 | 542 | 454 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-158 | 97 | 542 | 450 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 5.0e-172 | 18 | 542 | 552 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02416 | PLN02416 | 0 | 22 | 542 | 521 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 233 | 528 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH56489.1 | 0 | 22 | 542 | 35 | 543 | pectin methylesterase 1 [Prunus persica] |
RefSeq | NP_180212.1 | 0 | 17 | 542 | 18 | 547 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002273535.1 | 0 | 23 | 542 | 32 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326320.1 | 0 | 22 | 542 | 29 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516192.1 | 0 | 25 | 542 | 37 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 234 | 542 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 233 | 542 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 7e-20 | 243 | 497 | 44 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 2e-19 | 243 | 501 | 18 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-19 | 243 | 501 | 18 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |