Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 481656 |
Family | GH35 |
Protein Properties | Length: 847 Molecular Weight: 92475.9 Isoelectric Point: 7.5675 |
Chromosome | Chromosome/Scaffold: 4 Start: 11672897 End: 11677553 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 336 | 0 |
LVIDGKRKVLISGSIHYPRSTPEMWPELIKKSKDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLVEEAGLYVHLRIGPYVCAEWNYGGFPVWLH FVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKIYIKWSASMALSLDTGVPWNMCQQADAPDPMINTCNG FYCDQFTPNSNSKPKMWTENWSGWFLGFGDPSPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGGPLISTSYDYDAPIDEYGLLRQPKWGHLR DLHK |
Full Sequence |
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Protein Sequence Length: 847 Download |
MVKGRKMEMI LLLILQIMMA ATAVNVTYDH RALVIDGKRK VLISGSIHYP RSTPEMWPEL 60 IKKSKDGGLD VIETYVFWSG HEPEKNKYNF EGRYDLVKFV KLVEEAGLYV HLRIGPYVCA 120 EWNYGGFPVW LHFVPGIKFR TDNEPFKEEM QRFTTKIVDL MKQEKLYASQ GGPIILSQIE 180 NEYGNIDSAY GAAAKIYIKW SASMALSLDT GVPWNMCQQA DAPDPMINTC NGFYCDQFTP 240 NSNSKPKMWT ENWSGWFLGF GDPSPYRPVE DLAFAVARFY QRGGTFQNYY MYHGGTNFDR 300 TSGGPLISTS YDYDAPIDEY GLLRQPKWGH LRDLHKAIKL CEDALIATDP TISSLGSNLE 360 AAVYKTASGS CAAFLANVGT KSDATVSFNG ESYHLPAWSV SILPDCKNVA FNTAKINSAT 420 EPTAFARQSL KPDGGSSAEL GSEWSYIKEP IGISKADAFL KPGLLEQINT TADKSDYLWY 480 SLRMDIKGDE TFLDEGSKAV LHIESLGQVV YAFINGKLAG SGHGKQKISL DIPINLAAGK 540 NTVDLLSVTV GLANYGAFFD LVGAGITGPV TLKSAKGGSS IDLASQQWTY QVGLKGEDTG 600 LATVDSSEWV SKSPLPTKQP LIWYKTTFDA PSGSEPVAID FTGTGKGIAW VNGQSIGRYW 660 PTSIAGNGGC TDSCDYRGSY RANKCLKNCG KPSQTLYHVP RSWLKPSGNT LVLFEEMGGD 720 PTQISFGTKQ TGSNLCLMVS QSHPPPVDTW TSDSKISNRN RTRPVLSLKC PVSTQVISSI 780 KFASFGTPQG TCGSFTHGHC NSSRSLSVVQ KACIGSRSCN VEVSTRVFGE PCRGVIKSLA 840 VEASCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 7.0e-8 | 48 | 189 | 166 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 4.0e-23 | 768 | 845 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-25 | 26 | 328 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 7.0e-169 | 32 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 846 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21482.1 | 0 | 1 | 846 | 1 | 839 | putative beta-galactosidase [Arabidopsis thaliana] |
DDBJ | BAD20774.2 | 0 | 1 | 846 | 7 | 851 | beta-galactosidase [Raphanus sativus] |
EMBL | CAB64744.1 | 0 | 1 | 846 | 7 | 852 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_850121.1 | 0 | 1 | 846 | 7 | 852 | BGAL8 (beta-galactosidase 8); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002530296.1 | 0 | 4 | 846 | 2 | 842 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 33 | 334 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0002 | 512 | 730 | 411 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 7e-38 | 33 | 321 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.001 | 619 | 735 | 505 | 595 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 7e-38 | 33 | 321 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |