Basic Information | |
---|---|
Species | Arabidopsis lyrata |
Cazyme ID | 482124 |
Family | GT48 |
Protein Properties | Length: 1937 Molecular Weight: 224619 Isoelectric Point: 9.4194 |
Chromosome | Chromosome/Scaffold: 4 Start: 15085994 End: 15096756 |
Description | glucan synthase-like 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT48 | 1038 | 1791 | 0 |
VPSNLEARRRLTFFSNSLFMEMPDAPKIRNMLSFSVLTPYYSEDVLFSIFGLEQQNEDGVSILFYLQKIFPDEWTNFLERVKCGSEEELRAREELEEELR LWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEELMKGYKALELTSEDASKSGTSLWAQCQALADMKFTFVVSCQQYSIQKRSGDQRAKDILRLMTT YPSLRVAYIDEVEQTQKESYKGADEKIYYSALVKAAPQTKSMDSSESVQTLDQVIYRIKLPGPAILGEGKPENQNHSIIFTRGEGLQTIDMNQDNYMEEA FKMRNLLQEFLVKHGGVRTPTILGLREHIFTGSVSSLAWFMSNQENSFVTIGQRVLASPLKVRFHYGHPDVFDRLFHLTRGGVCKASKVINLSEDIFAGF NSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDLYRLGHRFDFFRMLSCYFTTIGFYFSTMLTVLTVYVFLYGRLYLVLSGLEEGL SNQKAFRSNMPLQAALASQSFVQIGFLMALPMMMEIGLERGFHNALIDFVLMQLQLASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAEN YRFYSRSHFVKGIELMILLLVYQIFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWIYNRGGIGVPPEKSWESWWEKEIG HLRHSGKRGIILEIVLALRFFIFQYGLVYQLSTFKQENQSLWIYGASWFVILFI |
Full Sequence |
---|
Protein Sequence Length: 1937 Download |
MAQRRGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA 60 YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET TLAGRQKSDA REMQSFYQHY 120 YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS 180 QIYVPYNILP LDPDSQNQAI MRFPEIQATV IALRNTRGLP WPAGHKKKLD EDMLDWLQTM 240 FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCMYLG 300 RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS 360 VSPMTGEHIK PAYGGEEEAF LQKVVTPIYK TIAKEAKRSR GGKSKHSEWR NYDDLNEYFW 420 SVRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD 480 RMWSFYILCL QAMIIIAWNG SGDLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK 540 SRHSMSFHVK LRFIFKAVAA AIWVILMPLT YAYSWRTPSG FAQTIKNWFG GHQNSSPSFF 600 IMVILIYLSP NMLSTLLFAF PFIRRYLERS DFKIVMLMMW WSQPRLYIGR GMHESALSLF 660 KYTMFWVVLL ISKLAFSFYA EQIKPLVKPT KDIMRVHISV YRWHEFFPHA KSNMGVVIAL 720 WSPVILVYFM DTQIWYAIVS TLVGGLNGAF RRLGEIRTLG MLRSRFQSLP EAFNACLIPS 780 EKTEPPKKKG IMATFSRKFD QVPSSKDKEA ARFAQMWNKI ISSFREEDLI SNREMELLLV 840 PYWADRDLDI IRWPPFLLAS KIPIALDMAK DSNGKDRELT KRLSVDSYMT CAVRECYASF 900 KNLINFLVVG EREGQVINEI FSRIDEHIEK ETLIKDLNLS ALPDLYGQFV RLIEYLMQNR 960 EEDKDQIVIV LLNMLEVVTR DIMEEEVPSM LESTHNGTYV KYDVMTPLHQ QRKYFSQLRF 1020 PIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE 1080 DVLFSIFGLE QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA 1140 SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS KSGTSLWAQC 1200 QALADMKFTF VVSCQQYSIQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTQKESYKGA 1260 DEKIYYSALV KAAPQTKSMD SSESVQTLDQ VIYRIKLPGP AILGEGKPEN QNHSIIFTRG 1320 EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN 1380 QENSFVTIGQ RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST 1440 LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH RFDFFRMLSC 1500 YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ 1560 IGFLMALPMM MEIGLERGFH NALIDFVLMQ LQLASVFFTF QLGTKTHYYG RTLFHGGAEY 1620 RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW 1680 FMVVTWLFAP FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR 1740 HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF ILLIVKGLGM 1800 GRQRFSTNFQ LLFRIIKGFV FLTFLGILIT FIALRLLTPK DIFLCMLAFM PTGWGMLLDS 1860 GHRLGRWLEA MRFSWVCFCE ILMGLLLFTP VAFLAWFPFV SEFQTRMLFN QAFSRGLQIS 1920 RILGGQRKDR SSKNKE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 6.0e-13 | 42 | 155 | 122 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 3.0e-56 | 316 | 432 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1038 | 1792 | 818 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD30609.1 | 0 | 1 | 1936 | 1 | 1878 | AC007153_1 Highly similar to putative callose synthase catalytic subunit [Arabidopsis thaliana] |
GenBank | AAK37413.1 | 0 | 1 | 1936 | 1 | 1950 | AF237733_1 callose synthase 1 catalytic subunit [Arabidopsis thaliana] |
RefSeq | NP_563743.2 | 0 | 1 | 1936 | 1 | 1950 | CALS1 (CALLOSE SYNTHASE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_850178.1 | 0 | 1 | 1936 | 1 | 1959 | ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q9SL03 | 0 | 1 | 1936 | 1 | 1951 | CALS2_ARATH RecName: Full=Callose synthase 2; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 3 |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.008 | 46 | 165 | 21 | 139 | B Chain B, Lip5-chmp5 |