Basic Information | |
---|---|
Species | Arabidopsis lyrata |
Cazyme ID | 482210 |
Family | GT47 |
Protein Properties | Length: 470 Molecular Weight: 54967.6 Isoelectric Point: 9.3576 |
Chromosome | Chromosome/Scaffold: 4 Start: 15491366 End: 15492775 |
Description | galactosyltransferase 13 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 66 | 413 | 0 |
CAGRYVYMHDLPSRFNNDLIKSCEAYIELRNKCKYLVNSGFGPRILEDKHNHTTQVLTIKTGSWYYTNQFMLEVIFREKMRHYECLTNDSSLSSAVFVPF YAGFDVRRFWGYNVKLRDELGEDLAQWLRERPEWKKMYGRDHFFVTGRVGRDFRRVTDQDSDWGNKLMRLPEFKNITMLSIETNSWSNEFAVPYPTYFHP KSRTEVKRWQMQVRMMQRRYLFSFVGANRPEMKESIRGEIIRQCLASQGSCKFLDCDTSTKDCSDPVKVMEVFQDSVFCLQPPGDTPTRRSTFDSILAGC IPVLFSPDSVYNQYKWYFPKDHTKYSVYISEEDVKNGKVSIEKLLASI |
Full Sequence |
---|
Protein Sequence Length: 470 Download |
MEKFNPKKKK LVSKRALKLL IEILPTPLFS MLFLIHINQI ANYLFLSDKE TLNITVRAMQ 60 GGIDTCAGRY VYMHDLPSRF NNDLIKSCEA YIELRNKCKY LVNSGFGPRI LEDKHNHTTQ 120 VLTIKTGSWY YTNQFMLEVI FREKMRHYEC LTNDSSLSSA VFVPFYAGFD VRRFWGYNVK 180 LRDELGEDLA QWLRERPEWK KMYGRDHFFV TGRVGRDFRR VTDQDSDWGN KLMRLPEFKN 240 ITMLSIETNS WSNEFAVPYP TYFHPKSRTE VKRWQMQVRM MQRRYLFSFV GANRPEMKES 300 IRGEIIRQCL ASQGSCKFLD CDTSTKDCSD PVKVMEVFQD SVFCLQPPGD TPTRRSTFDS 360 ILAGCIPVLF SPDSVYNQYK WYFPKDHTKY SVYISEEDVK NGKVSIEKLL ASIISEERIL 420 KMRNGVEKII PKIIYTKPGE VGPEKIEDAF EIAVARVLER VSLFKMTRI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-63 | 66 | 413 | 364 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180833.1 | 0 | 1 | 469 | 1 | 468 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | NP_180834.1 | 0 | 18 | 465 | 7 | 478 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002321098.1 | 0 | 64 | 462 | 48 | 439 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 39 | 461 | 57 | 460 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002518609.1 | 0 | 64 | 461 | 74 | 463 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |