| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 482241 |
| Family | GH9 |
| Protein Properties | Length: 525 Molecular Weight: 59103.3 Isoelectric Point: 5.8229 |
| Chromosome | Chromosome/Scaffold: 4 Start: 15637008 End: 15645209 |
| Description | glycosyl hydrolase 9B8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 38 | 501 | 0 |
| DYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDTLASTGELSHALEAIKWGTDYF IKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFGFGDKYRGKYDESLKVVK SYYASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNING TNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPTRVHHRGASIASFKE HKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDEQDEFDDRRDNYVQTEACTYNTAPLVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 525 Download |
| MDHRHKPCHF LLLLLLLITV FSAVLADVSS ETDVGRFDYG EALSKSLLYF EAQRSGRLPY 60 NQRVTWRDHS GLTDGLEQGV DLVGGYHDAG DHVKFGLPMA FTVTMLSWSV IEYGDTLAST 120 GELSHALEAI KWGTDYFIKA HTSPNVLWAE VGDGDTDHYC WQRPEDMTTS RRAFKIDENN 180 PGSDIAGETA AAMAAASIVF RSTNPHYSHL LLHHAQQLFG FGDKYRGKYD ESLKVVKSYY 240 ASVSGYMDEL LWGATWLYRA TDNEHYMSYV VDMAHQLGGL SWAMSEFSWD VKYAGVQLLA 300 SMLLKEEKHK QHSKVLQQYK SKADHYLCSI LNKNINGTNV QRTPAGLLYV RQWNNMQYVS 360 TASFLLTVYS DHLRKSNTDL ECHEGTVTPD EMLGFAKSQI DYILGSNPME TSYLVGYGPK 420 YPTRVHHRGA SIASFKEHKG FIGCTQGYDN WYGRSEPNPS VLVGALVGGP DEQDEFDDRR 480 DNYVQTEACT YNTAPLVGVF ARLIELEEQK LEEEDVSLVA TYKR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02420 | PLN02420 | 0 | 1 | 522 | 522 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 18 | 502 | 485 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 37 | 502 | 466 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 38 | 501 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 0 | 38 | 502 | 465 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN81074.1 | 0 | 17 | 522 | 13 | 547 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_180858.1 | 0 | 1 | 524 | 4 | 525 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002321149.1 | 0 | 15 | 522 | 26 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002525326.1 | 0 | 7 | 522 | 22 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| RefSeq | XP_002529469.1 | 0 | 37 | 517 | 27 | 501 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 37 | 506 | 3 | 431 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1ksc_A | 0 | 37 | 506 | 3 | 431 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1ks8_A | 0 | 37 | 506 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 37 | 505 | 4 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 37 | 505 | 4 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
