| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 482815 |
| Family | AA1 |
| Protein Properties | Length: 558 Molecular Weight: 61586.9 Isoelectric Point: 9.6491 |
| Chromosome | Chromosome/Scaffold: 4 Start: 18414351 End: 18418163 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 25 | 545 | 0 |
| IRHYKFNVVMKNTTRLCSSKPIVTVNGRYPGPTIYAREDDTLLIKVVNHVKYNLSIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLW WHAHILWLRATVYGALVILPKRGVPYPFPKPDHEKVIVLGEWWKSDTENIINEALKSGLAPNVSDAHMINGHPGPVKNCPSQGYKLSVENGKTYLLRLVN AALNEELFFKVAGHIFTVVEVDAVYVKPFKTDTVLIAPGQTTNVLLTASKSAGKYLVTASPFMDAPIAVDNVTATATVHYSGTLSSSPTILTLPPPQNAT SIANNFTKSLRSLNSKKYPALVPTTIDHHLFFTVGLGLNACPTCKAGNGSRVVASINNVTFIMPKTALLPAHYFNTSGVFTTDFPKNPPHVFNYSGGSVT NMATETGTRLYKLPYNATVQLVLQDTGVISPENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLIDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLE VHTTWGLKMAFLVENGKGPNQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MGYMVWFLFL ISFFFVFPAP SESIIRHYKF NVVMKNTTRL CSSKPIVTVN GRYPGPTIYA 60 REDDTLLIKV VNHVKYNLSI HWHGVRQVRT GWADGPAYIT QCPIQPGQVY TYNYTLTGQR 120 GTLWWHAHIL WLRATVYGAL VILPKRGVPY PFPKPDHEKV IVLGEWWKSD TENIINEALK 180 SGLAPNVSDA HMINGHPGPV KNCPSQGYKL SVENGKTYLL RLVNAALNEE LFFKVAGHIF 240 TVVEVDAVYV KPFKTDTVLI APGQTTNVLL TASKSAGKYL VTASPFMDAP IAVDNVTATA 300 TVHYSGTLSS SPTILTLPPP QNATSIANNF TKSLRSLNSK KYPALVPTTI DHHLFFTVGL 360 GLNACPTCKA GNGSRVVASI NNVTFIMPKT ALLPAHYFNT SGVFTTDFPK NPPHVFNYSG 420 GSVTNMATET GTRLYKLPYN ATVQLVLQDT GVISPENHPV HLHGFNFFEV GRGLGNFNST 480 KDPKNFNLID PVERNTIGVP SGGWVVIRFR ADNPGVWFMH CHLEVHTTWG LKMAFLVENG 540 KGPNQSILPP PKDLPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-49 | 31 | 147 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-62 | 21 | 547 | 571 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-82 | 21 | 535 | 539 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-87 | 25 | 535 | 544 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 24 | 557 | 538 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC49536.1 | 0 | 8 | 557 | 7 | 557 | diphenol oxidase [Nicotiana tabacum] |
| RefSeq | NP_565881.1 | 0 | 3 | 557 | 4 | 558 | IRX12 (IRREGULAR XYLEM 12); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002322961.1 | 0 | 7 | 557 | 6 | 557 | laccase 1a [Populus trichocarpa] |
| RefSeq | XP_002322962.1 | 0 | 6 | 557 | 5 | 557 | laccase 1b [Populus trichocarpa] |
| RefSeq | XP_002520425.1 | 0 | 6 | 557 | 6 | 556 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 23 | 535 | 1 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asq_A | 0 | 23 | 535 | 1 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asp_B | 0 | 23 | 535 | 1 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asp_A | 0 | 23 | 535 | 1 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1aso_B | 0 | 23 | 535 | 1 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
