Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 483407 |
Family | CE8 |
Protein Properties | Length: 519 Molecular Weight: 56755 Isoelectric Point: 9.4558 |
Chromosome | Chromosome/Scaffold: 4 Start: 21051788 End: 21053622 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 213 | 501 | 0 |
DVVVAADGSGTHKTIGEALLSTSLASSGGRTTIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNN AGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGISIQNCRI TAESMTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEFENSGPGSSVSGRVKWSGYHSSLTLTEAEKFTVAVFIDG |
Full Sequence |
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Protein Sequence Length: 519 Download |
MASSSSISNH KIPKTLMFLL ILNFLYLIQP TSAVSTSSNS NSHFSRFSRH RSSPSSKPKQ 60 GFLASVQESM NHALLARSLA FNLTLSHRTV QTHTFDPVHD CLELLDDTLD MLSRIHADND 120 EEDVHTWLSA ALTNQDTCEQ SLQEKSKSYK HGLAMDFVAR NLTGLLTNSL DLFVSVKSKH 180 RKLLSEQKYF PTFVPSSEQR RLLEAPVEEL KVDVVVAADG SGTHKTIGEA LLSTSLASSG 240 GRTTIYLKAG TYHENINIPT KQKNVMLVGD GKGKTVIVGS RSNRGGWTTY KTATVAAMGE 300 GFIARDMTFV NNAGPKSEQA VALRVGADKS VVHRCSVEGY QDSLYTHSKR QFYRETDITG 360 TVDFIFGNSA VVFQSCNIAA RKPLPGQRNF VTAQGRSNPG QNTGISIQNC RITAESMTYL 420 GRPWKEYSRT VVMQSFIGGS IHPSGWSPWS GGFGLKSLFY GEFENSGPGS SVSGRVKWSG 480 YHSSLTLTEA EKFTVAVFID GNMWLPSTGV SFDSGLVK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 4.0e-140 | 98 | 516 | 455 | + pectinesterase | ||
PLN02484 | PLN02484 | 8.0e-149 | 66 | 516 | 481 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-153 | 100 | 516 | 434 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-171 | 213 | 502 | 299 | + Pectinesterase. | ||
PLN02170 | PLN02170 | 0 | 1 | 517 | 531 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK69695.1 | 0 | 43 | 517 | 32 | 549 | putative pectin methylesterase LuPME1 [Linum usitatissimum] |
EMBL | CBI39447.1 | 0 | 180 | 517 | 98 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181833.1 | 0 | 1 | 517 | 1 | 517 | ATPMEPCRD; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_191460.1 | 0 | 40 | 517 | 37 | 529 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002527752.1 | 0 | 123 | 517 | 174 | 582 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 213 | 516 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 213 | 516 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 5e-17 | 217 | 473 | 12 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-17 | 217 | 473 | 12 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-17 | 217 | 473 | 12 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |