Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 483478 |
Family | CBM43 |
Protein Properties | Length: 126 Molecular Weight: 13872.8 Isoelectric Point: 7.1393 |
Chromosome | Chromosome/Scaffold: 4 Start: 21333185 End: 21334269 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 35 | 114 | 6.7e-28 |
WCVAKPGTPIEQLVKNLNYVCSNSGIHCEVVSKGGTCYDPINLYNSASVAMNLYYQNQGRHYSKCDFEGSGIITVTDPSE |
Full Sequence |
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Protein Sequence Length: 126 Download |
MTKAQICFSF IILLYISSVG NFMRVNAQAP GQGSWCVAKP GTPIEQLVKN LNYVCSNSGI 60 HCEVVSKGGT CYDPINLYNS ASVAMNLYYQ NQGRHYSKCD FEGSGIITVT DPSEFYGCCI 120 YEFYK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-16 | 34 | 106 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-30 | 34 | 121 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-20 | 33 | 122 | 11 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |