y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 483877 |
Family | CE8 |
Protein Properties | Length: 578 Molecular Weight: 63242.3 Isoelectric Point: 9.0871 |
Chromosome | Chromosome/Scaffold: 4 Start: 22874549 End: 22876557 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 312 | 560 | 0 |
KKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWLGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVV SGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKLGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWRI WDGENYHMSCRYVEYNNRGPGAFTNRRVNWAKVARSAGEVNGFTVANWL |
Full Sequence |
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Protein Sequence Length: 578 Download |
MIGKVVVSVA SILLIVGVAI GVVAFINKNG DANLSPQMKA VRGICEATSD KASCVKTLEP 60 VKSDDPNKLI KAFMLATRDA LTTSSNFTGQ TEVNMGSSIS PNNKAVLDYC KRVFMYALED 120 LSTIVEEMGE DLNQIGSKID QLKQWLIGVY NYQTDCLDDI EEDDLRKTIG EGIANSKILT 180 TNAIDIFHNV VSAMAKLNNK VDDFKNMTGG IPTPDNKGAP PVVDESPVAD PDGPARRLLE 240 DIDETGIPTW VSGADRKLMA KAGRGGNGGA VGSERPLWWL RTEADSLRRF NKPLMLVLRI 300 TQADASSTSR LKKNNIFMFG DGARKTVISY NRSVALSRGT TTSLSATVQV ESEGFMAKWL 360 GFKNTAGPMG HQAAAIRVNG DRAVIFNCRF DGYQDTLYVN NGRQFYRNCV VSGTVDFIFG 420 KSATVIQNTL IVVRKGSKGQ YNTVTADGNE LGLGMKLGIV LQNCRIVPDR KLTPERLTVA 480 TYLGRPWKKF STTVIMSTEM GDLIRPEGWR IWDGENYHMS CRYVEYNNRG PGAFTNRRVN 540 WAKVARSAGE VNGFTVANWL GPIYWIQQAN VPVTIGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02990 | PLN02990 | 3.0e-85 | 39 | 574 | 550 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 4.0e-86 | 28 | 577 | 558 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-111 | 312 | 561 | 252 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 5.0e-112 | 39 | 577 | 564 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02197 | PLN02197 | 0 | 27 | 577 | 565 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 312 | 577 | 55 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 313 | 577 | 52 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-17 | 342 | 559 | 85 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-17 | 342 | 559 | 85 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-17 | 342 | 559 | 85 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |