| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 484788 |
| Family | GT4 |
| Protein Properties | Length: 809 Molecular Weight: 92637.1 Isoelectric Point: 6.42 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10006834 End: 10011904 |
| Description | sucrose synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 567 | 733 | 0 |
| LKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVGGDRSKESQDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKG AFVQPALYEAFGLTVVEAMTSGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDQAAETLADFFTKCKH | |||
| Full Sequence |
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| Protein Sequence Length: 809 Download |
| MANAERVITR VHSQRERLDA TLIAQKNEVL ALLSRVEAKG KGILQYHQII AEFEAMPLET 60 QKKLQGGAFF EILRSAQEAI VLPPFVALAV RPRPGVWEYV RVNLHDLVVD ELQASEYLQF 120 KEELVDGIRN GNFTLELDFE PFNAAFPRPT LNKYIGNGVE FLNRHLSAKL FHDKESLHPL 180 LKFLRLHSHE GKTLMLNDRI QNLNTLQHNL RKAEEYLMEL KPETPYSEFD HKFQGIGLER 240 GWGDTAVRVL DMIRLLLDLL EAPDPCTLGN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD 300 TGGQVVYILD QVRALETEML QRTKQQGLTI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ 360 YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI SKELQGKPDL IIGNYSDGNL 420 VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT 480 STFQEIAGSK DTVGQYESHT AFTLPGLYRV VHGIDVFDPK FNIVSPGADM NIYFAYTEEK 540 RRLTAFHQEI EELLYSDVEN EKHLCVLKDK KKPILFTMAR LDRVKNLSGL VEWYGKNTRL 600 RELVNLVVVG GDRSKESQDN EEKAEMKKMY DLIEEYKLNG QFRWISSQMN RVRNGELYRY 660 ICDTKGAFVQ PALYEAFGLT VVEAMTSGLP TFATCNGGPA EIIVHGKSGF HIDPYHGDQA 720 AETLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSE RLLTLTGVYG FWKHVSNLDR 780 LESRRYLEMF YALKYRPLAQ AVPLAQEE* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 3.0e-58 | 281 | 765 | 492 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 6.0e-124 | 280 | 764 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 2 | 808 | 810 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 26 | 805 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 9 | 556 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACV72640.1 | 0 | 1 | 807 | 1 | 805 | sucrose synthase 1 [Gossypium hirsutum] |
| EMBL | CAA50317.1 | 0 | 1 | 808 | 1 | 807 | sucrose synthase [Arabidopsis thaliana] |
| RefSeq | NP_197583.1 | 0 | 1 | 808 | 1 | 808 | SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
| RefSeq | NP_566865.2 | 0 | 1 | 808 | 1 | 808 | SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002324136.1 | 0 | 4 | 807 | 2 | 805 | hypothetical protein POPTRDRAFT_835735 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 1 | 808 | 1 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3s29_G | 0 | 1 | 808 | 1 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3s29_F | 0 | 1 | 808 | 1 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3s29_E | 0 | 1 | 808 | 1 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3s29_D | 0 | 1 | 808 | 1 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 800 | 8 | 807 | 0 |
| BU103683 | 807 | 2 | 807 | 0 |
| CX109054 | 598 | 103 | 700 | 0 |
| FG227316 | 453 | 278 | 730 | 0 |
| GW837855 | 413 | 343 | 755 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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