| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 484821 |
| Family | GH9 |
| Protein Properties | Length: 489 Molecular Weight: 54093.6 Isoelectric Point: 8.9995 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10509889 End: 10512621 |
| Description | glycosyl hydrolase 9A4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 36 | 483 | 0 |
| NYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLVNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYF LKCASRKNRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIAAEAAAAFAASSIVFRHVDHKYARRLLNKAKLLFKLAKSHKGTYDGECPFYC SNSGYNDELIWAATWLYKATRNDLYLSYLKFEAISAYVAEFSWDLKYAGAQILITKLIFEGAKGLDLYKQQADSFVCSNLPGSPYHQVFTTPGGMIHLRD GANSQYVTATAFLFSTYADILQKHNQKISCGSHQFDSTHLMAFAKKQIDYILGHNPQGRSYMVGFGPNPPKQAHHRGASVPMHEANAPLSCPLSFVKWYN KNVPNANELTGAILGGPDRQDKFQDLRWTSVYTEPCTYINSIAVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MGNYGDKGRG NVVIRAILLG LYGIISIVCV NGTNINYKDA LTKSLIFLEA QRSGKLPPNN 60 RVPWRGDSAL DDGKLVNVDL SGGYYDAGDN VKYGLPMAFT ITTLAWSTIT YEKELRATGE 120 LENARAAIRW GTDYFLKCAS RKNRLYVQVG DPNADHQCWA RPENMKTPRT VLEISDKVPG 180 TEIAAEAAAA FAASSIVFRH VDHKYARRLL NKAKLLFKLA KSHKGTYDGE CPFYCSNSGY 240 NDELIWAATW LYKATRNDLY LSYLKFEAIS AYVAEFSWDL KYAGAQILIT KLIFEGAKGL 300 DLYKQQADSF VCSNLPGSPY HQVFTTPGGM IHLRDGANSQ YVTATAFLFS TYADILQKHN 360 QKISCGSHQF DSTHLMAFAK KQIDYILGHN PQGRSYMVGF GPNPPKQAHH RGASVPMHEA 420 NAPLSCPLSF VKWYNKNVPN ANELTGAILG GPDRQDKFQD LRWTSVYTEP CTYINSIAVG 480 VLAKLAAA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 3.0e-147 | 9 | 476 | 483 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 6.0e-157 | 36 | 476 | 455 | + Glycosyl hydrolase family 9. | ||
| PLN02266 | PLN02266 | 4.0e-157 | 36 | 476 | 452 | + endoglucanase | ||
| PLN02613 | PLN02613 | 9.0e-173 | 34 | 476 | 446 | + endoglucanase | ||
| PLN02909 | PLN02909 | 0 | 7 | 477 | 471 | + Endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB83158.1 | 0 | 1 | 488 | 1 | 483 | cellulase-like protein [Arabidopsis thaliana] |
| EMBL | CAN82881.1 | 0 | 30 | 486 | 8 | 464 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI20730.1 | 0 | 16 | 479 | 17 | 475 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20730.1 | 0 | 19 | 488 | 500 | 969 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189972.2 | 0 | 1 | 488 | 1 | 486 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 36 | 487 | 4 | 430 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1ksc_A | 0 | 36 | 487 | 4 | 430 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1ks8_A | 0 | 36 | 487 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 35 | 485 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 35 | 485 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
