| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 485079 |
| Family | GH3 |
| Protein Properties | Length: 610 Molecular Weight: 66499.7 Isoelectric Point: 4.9433 |
| Chromosome | Chromosome/Scaffold: 5 Start: 13011379 End: 13014405 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 88 | 323 | 0 |
| LASRLGIPIIYGTDAVHGNNNVYGATVFPHNIGLGATRDADLVRRIGAATALEVRASGAHWAFAPCVAVLRDPRWGRCYESYGEDPGLVCEMASLVSGLQ GVPPEEHLNGYPFVAGRNNVVACVKHFVGDGGTDKGINEGNTIASYEDLEKIHIPPYLNCLAQGVSTVMASYSSWNGTRLHADRFLLTEILKEKLGFKGF LVSDWEGLDRLSEPQGSNYRYCIKTAVNAGIDMVMV | |||
| Full Sequence |
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| Protein Sequence Length: 610 Download |
| MVVKEESSCV YKNQDAPVEV RVKDLLSRMT LPEKIGQMTQ IERRVASHAA FTDFFIGSVL 60 NAGGSVPFED AKSSDWADMI DGFQRSALAS RLGIPIIYGT DAVHGNNNVY GATVFPHNIG 120 LGATRDADLV RRIGAATALE VRASGAHWAF APCVAVLRDP RWGRCYESYG EDPGLVCEMA 180 SLVSGLQGVP PEEHLNGYPF VAGRNNVVAC VKHFVGDGGT DKGINEGNTI ASYEDLEKIH 240 IPPYLNCLAQ GVSTVMASYS SWNGTRLHAD RFLLTEILKE KLGFKGFLVS DWEGLDRLSE 300 PQGSNYRYCI KTAVNAGIDM VMVPFKYEQF IQDMTDLVKS GEISMARVND AVERILRVKF 360 VSGLFEYPLT DRSLLPTVGC KEHRELAQEA VRKSLALLKN GKNADKPFLP LDRNAKRILV 420 TGTHADDLGY QCGGWTKTWF GLSGRITIGT TLLDAIKEAV GDETEVIYEK TPSKETLASS 480 EGFSYAIVAV GEPPYAETMG DNSELKISFN GSDIVTAVAE TIPTLVILIS GRPVVLEPTV 540 LEKTEALVAA WLPGTEGQGM ADVIFGDYDF EGKLPVSWFK RVEHLPLDAQ TNSYDPLFPF 600 GFGLTSKPV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 5.0e-45 | 13 | 605 | 658 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-51 | 397 | 605 | 226 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 7.0e-83 | 22 | 605 | 667 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 4.0e-87 | 30 | 358 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 7.0e-89 | 29 | 466 | 446 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 10 | 607 | 4 | 600 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1iex_A | 0 | 10 | 607 | 4 | 600 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1iew_A | 0 | 10 | 607 | 4 | 600 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1iev_A | 0 | 10 | 607 | 4 | 600 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1ieq_A | 0 | 10 | 607 | 4 | 600 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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