Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 485655 |
Family | GH35 |
Protein Properties | Length: 729 Molecular Weight: 82138.9 Isoelectric Point: 8.1342 |
Chromosome | Chromosome/Scaffold: 5 Start: 16307365 End: 16312680 |
Description | beta-galactosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
LIINGQRRILISGSIHYPRSTPEMWPDLIKKAKEGGLDVIQTYVFWNGHEPSPGNYYFQDRYDLVKFTKLVHQAGLYLDLRIGPYVCAEWNFGGFPVWLK YVPGIVFRTDNEPFKIAMQRFTKKIVDMMKEEKLFETQGGPIILSQIENEYGPMEWEMGAAGKAYSKWTAEMALGLSTGVPWIMCKQEDAPYPIIDTCNG FYCEGFKPNSDNKPKLWTENWTGWFTEFGGAIPNRPVEDIAFSVARFIQNGGSFLNYYMYYGGTNFDRTAGVFIATSYDYDAPLDEYGLLREPKYSHLKE LHK |
Full Sequence |
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Protein Sequence Length: 729 Download |
MGMHFRDKAW IFLAILCFSS LIWSTEAVVT YDHKALIING QRRILISGSI HYPRSTPEMW 60 PDLIKKAKEG GLDVIQTYVF WNGHEPSPGN YYFQDRYDLV KFTKLVHQAG LYLDLRIGPY 120 VCAEWNFGGF PVWLKYVPGI VFRTDNEPFK IAMQRFTKKI VDMMKEEKLF ETQGGPIILS 180 QIENEYGPME WEMGAAGKAY SKWTAEMALG LSTGVPWIMC KQEDAPYPII DTCNGFYCEG 240 FKPNSDNKPK LWTENWTGWF TEFGGAIPNR PVEDIAFSVA RFIQNGGSFL NYYMYYGGTN 300 FDRTAGVFIA TSYDYDAPLD EYGLLREPKY SHLKELHKVI KLCEPALVSV DPTITSLGDK 360 QEVHVFKSKT SCAAFLSNYD TSSAARIMFR GFPYDLPPWS VSILPDCKTE YYNTAKIRAP 420 TILMKMVPTS TKFSWESYNE GSPSSNDDGT FVKDGLVEQI SMTRDKTDYF WYLTDITIGS 480 DESFLKTGDD PLLTIFSAGH ALHVFVNGLL AGTSYGALSN SKLTFSQKIK LSVGINKLAL 540 LSTAVGLPNA GVHYETWNTG VLGPVTLKGV NSGTWDMSKW KWSYKIGIRG EAMSFHTIAG 600 SSAVKWWIKG SFVVKKEPLT WYKSSFDTPK GNEPLALDMN TMGKGQVWVN GHNIGRHWPA 660 YTARGNCGRC NYAGIYNEKK CLSHCGEPSQ RWYHVPRSWL KPFGNLLVIF EEWGGDPSGI 720 SLVKRTAK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0002 | 51 | 187 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-21 | 29 | 331 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-154 | 35 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 11 | 726 | 717 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK96780.1 | 0 | 1 | 726 | 1 | 724 | beta-galactosidase [Arabidopsis thaliana] |
EMBL | CAB39679.1 | 0 | 1 | 728 | 1 | 729 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_190852.2 | 0 | 1 | 728 | 1 | 727 | BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | NP_849553.1 | 0 | 1 | 728 | 1 | 728 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
Swiss-Prot | Q9LFA6 | 0 | 1 | 728 | 1 | 727 | BGAL2_ARATH RecName: Full=Beta-galactosidase 2; Short=Lactase 2; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 9.00054e-42 | 29 | 344 | 11 | 339 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3thd_C | 9.00054e-42 | 29 | 344 | 11 | 339 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3thd_B | 9.00054e-42 | 29 | 344 | 11 | 339 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |