CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID48584.m000013
FamilyGT4
Protein PropertiesLength: 253 Molecular Weight: 27054.2 Isoelectric Point: 7.459
ChromosomeChromosome/Scaffold: 48584 Start: 177 End: 938
Descriptionsulfoquinovosyldiacylglycerol 2
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT4532083.9e-35
  RPPHILFVGRQVEKKGLEVLIRAMTRVREHFPEARVKVVGDGPLRARNEALAAELAAPVDFLGARSSEQVRRLMDECALFCLPSVVSATGDAEGLPISIL
  EAQAAGVPVVTSAVGGRDEGIVDGRTGFGFAERDHEALAGHLCRLLGDNALRDDMG
Full Sequence
Protein Sequence     Length: 253     Download
MAADPRVSFI AVSEAVRQRA ITGYQLPADK IEKVFIGVDV TTFRPGPITP GARPPHILFV    60
GRQVEKKGLE VLIRAMTRVR EHFPEARVKV VGDGPLRARN EALAAELAAP VDFLGARSSE    120
QVRRLMDECA LFCLPSVVSA TGDAEGLPIS ILEAQAAGVP VVTSAVGGRD EGIVDGRTGF    180
GFAERDHEAL AGHLCRLLGD NALRDDMGRE ARALAMERFD IRVCGRLLEA LYARRAAGVT    240
TPPASAVVGD VRP 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03808GT1_cap1E_like3.0e-419222218+
cd03798GT1_wlbH_like2.0e-4410223222+
cd03801GT1_YqgM_like2.0e-539220220+
cd03799GT1_amsK_like1.0e-559224218+
cd05844GT1_like_74.0e-639224218+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAB88839.101232164393putative hexosyltransferase [Gluconacetobacter xylinus]
RefSeqXP_002539932.1012531253glycosyltransferase, putative [Ricinus communis]
RefSeqYP_001602787.101232157386putative colanic acid biosynthesis glycosyl transferase [Gluconacetobacter diazotrophicus PAl 5]
RefSeqYP_001981856.101238149386glycosyl transferase, putative, gt4F [Cellvibrio japonicus Ueda107]
RefSeqYP_594162.18.40779e-459234151375glycosyl transferase, group 1 [Deinococcus geothermalis DSM 11300]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3oka_B0.00000000000337200171344A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3oka_A0.00000000000337200171344A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3okp_A0.00000000000337200171344A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3okc_A0.00000000000337200171344A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
PDB2gek_A0.0000000000510232165380A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FL441658138271620.000000000000001
DT746170207282220.0000000000001
JG941626208282230.0000000000001
DT749357207282220.0000000000001
FN023843173552240.0000000000001
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_004_00305.1Aquca_053_00022.3Aquca_053_00022.2Aquca_053_00022.1
Arabidopsis lyrata860579323188
Arabidopsis thalianaAT5G01220.1AT3G45100.2AT3G45100.1
Brachypodium distachyonBradi1g59860.1Bradi2g02800.1Bradi1g67200.1Bradi1g32610.1
Brassica rapaBra009633Bra005694Bra009589
Carica papayaevm.model.supercontig_163.3evm.model.supercontig_65.21
Capsella rubellaCarubv10000742mCarubv10019008m
Chlamydomonas reinhardtiiCre01.g038550.t1.3Cre16.g689150.t1.2Cre01.g006800.t1.3
Citrus clementinaCiclev10011473mCiclev10001141mCiclev10001076m
Citrus sinensisorange1.1g022615morange1.1g017114morange1.1g016648morange1.1g009759morange1.1g027511m
Cucumis sativusCucsa.176160.1Cucsa.143020.1
Eucalyptus grandisEucgr.A00516.1Eucgr.J00902.1
Fragaria vescamrna18817.1-v1.0-hybridmrna24819.1-v1.0-hybrid
Glycine maxGlyma03g14200.1Glyma01g27840.1Glyma18g42540.1Glyma07g17680.4Glyma07g17680.3
Glyma07g17680.2Glyma07g17680.1Glyma20g12140.9Glyma20g12140.8Glyma20g12140.7
Glyma20g12140.6Glyma20g12140.5Glyma20g12140.4Glyma20g12140.3Glyma20g12140.2
Glyma20g12140.10Glyma13g25060.1
Gossypium raimondiiGorai.012G112200.2Gorai.012G112200.1Gorai.002G261700.2Gorai.002G261700.6Gorai.002G261700.4
Gorai.002G261700.3Gorai.002G261700.1Gorai.003G143800.9Gorai.003G143800.8Gorai.003G143800.7
Gorai.003G143800.6Gorai.003G143800.5Gorai.003G143800.4Gorai.003G143800.3Gorai.003G143800.2
Gorai.003G143800.10Gorai.003G143800.1
Linum usitatissimumLus10004832Lus10002499Lus10024892Lus10022925
Malus domesticaMDP0000899469MDP0000143617MDP0000297386MDP0000273680MDP0000203472
MDP0000184748MDP0000198677
Manihot esculentacassava4.1_007989mcassava4.1_005643mcassava4.1_032287m
Medicago truncatulaMedtr4g015260.1Medtr7g067340.1
Mimulus guttatusmgv1a004620mmgv1a004551mmgv1a006150mmgv1a006148m
Oryza sativaLOC_Os01g04920.1LOC_Os07g01030.1LOC_Os03g15840.1LOC_Os07g16960.1
Panicum virgatumPavirv00011082mPavirv00023556mPavirv00064963mPavirv00000330mPavirv00022111m
Pavirv00063251mPavirv00030308mPavirv00006595mPavirv00056553mPavirv00006877m
Physcomitrella patensPp1s24_194V6.1Pp1s106_103V6.1
Phaseolus vulgarisPhvul.010G005100.1Phvul.008G106900.1Phvul.005G132400.1Phvul.002G226400.1
Picea abiesMA_158718g0080MA_60607g0010MA_159042g1330MA_159118g0680MA_159090g0090
MA_159042g1140
Populus trichocarpaPotri.016G112600.4Potri.016G112600.3Potri.016G112600.2Potri.016G112600.1Potri.006G097600.3
Potri.006G097600.2Potri.006G097600.1Potri.016G130000.1
Prunus persicappa004263mppa005676mppa018035m
Ricinus communis35899.m00002429969.m00027234675.m00002830418.m00001532791.m000022
29638.m00053127698.m000067
Setaria italicaSi020690mSi001496mSi035897mSi035683m
Selaginella moellendorffii170091406541
Sorghum bicolorSb02g000240.1Sb03g006480.1Sb01g040150.1Sb02g008800.1
Thellungiella halophilaThhalv10013276mThhalv10002532m
Vitis viniferaGSVIVT01033998001GSVIVT01024777001
Volvox carteriVocar20009459mVocar20001320m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)