| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 486019 |
| Family | GH17 |
| Protein Properties | Length: 408 Molecular Weight: 45719.9 Isoelectric Point: 9.2283 |
| Chromosome | Chromosome/Scaffold: 5 Start: 17678474 End: 17679895 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 31 | 353 | 0 |
| IGVTYSTPASISGTVQLSPDRIAEKVVSMKIPAVRLLDSNPAMIRAFAYTNVSLFLSVPNPLVPLLASNRSLAMRWVYRHVLPFHPRTKISIISVGNDVI SYSPDVSPFLLRAMQNVHLSLVDLRIFKISVSTTFSFFNIVPTAFPPSSAQFQQPNGEVIIRPILQFLERTNSSFLINLYPYNMYRSSFSIPIGFALFEE FPFNFRDDLTTGVRYRNLFDMMVDAVISSMAVMGHENLPVIVAETGWPSSGIDASEVDATLLYSEMFLKALLTHLRSGCGTPLRKEGVSEVYIFELVEKD AKQGIRNWGLLHHNMTSKYSFEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 408 Download |
| MKKMHSLSSY LLLLISLTAI ATPTTTSATT IGVTYSTPAS ISGTVQLSPD RIAEKVVSMK 60 IPAVRLLDSN PAMIRAFAYT NVSLFLSVPN PLVPLLASNR SLAMRWVYRH VLPFHPRTKI 120 SIISVGNDVI SYSPDVSPFL LRAMQNVHLS LVDLRIFKIS VSTTFSFFNI VPTAFPPSSA 180 QFQQPNGEVI IRPILQFLER TNSSFLINLY PYNMYRSSFS IPIGFALFEE FPFNFRDDLT 240 TGVRYRNLFD MMVDAVISSM AVMGHENLPV IVAETGWPSS GIDASEVDAT LLYSEMFLKA 300 LLTHLRSGCG TPLRKEGVSE VYIFELVEKD AKQGIRNWGL LHHNMTSKYS FEFSDGGKAG 360 RYKELLIGFF VQVVMIGYGY SDTFNLNFMN NYEWNVILGL THRNYRS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 267 | 332 | 66 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-55 | 55 | 353 | 308 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71832.1 | 0 | 25 | 323 | 26 | 323 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191137.1 | 0 | 1 | 407 | 1 | 429 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 25 | 375 | 26 | 380 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 50 | 360 | 62 | 370 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 28 | 359 | 31 | 362 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 3e-37 | 31 | 353 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 4e-35 | 53 | 353 | 15 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 4e-35 | 53 | 353 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 4e-35 | 53 | 353 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1ghs_B | 1e-33 | 31 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
