| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 486071 |
| Family | GH27 |
| Protein Properties | Length: 431 Molecular Weight: 47550.5 Isoelectric Point: 4.5848 |
| Chromosome | Chromosome/Scaffold: 5 Start: 17888634 End: 17891528 |
| Description | Melibiase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 262 | 359 | 4.6e-30 |
| YAGPGGWNDPDMLEIGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKIQANGEDDCQQVWSGPLSGDRIV | |||
| GH27 | 153 | 255 | 2e-32 |
| AGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNCFNLGIKPIKRYPPMRDALNATGRSIFYSLCEWGVDDPALWAKEVGNSWRTTDDINDTWASMTTI ADL | |||
| GH27 | 43 | 163 | 7.8e-34 |
| SFNSIYDTSMYGRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALLSSGLADLGYIHVNIDDCWSNLLRDSKGQLVPHPETFPSGIKLLADYVHS KGLKLGIYSDAGVFTCQVRPG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 431 Download |
| MKDSVLFLVG LFSLSVLVSQ SISGRVKAPL LQSNTGGLVF SKSFNSIYDT SMYGRLQLNN 60 GLARTPQMGW NSWNFFACNI NETVIKETAD ALLSSGLADL GYIHVNIDDC WSNLLRDSKG 120 QLVPHPETFP SGIKLLADYV HSKGLKLGIY SDAGVFTCQV RPGSLFHEVD DADIFASWGV 180 DYLKYDNCFN LGIKPIKRYP PMRDALNATG RSIFYSLCEW GVDDPALWAK EVGNSWRTTD 240 DINDTWASMT TIADLNNKWA AYAGPGGWND PDMLEIGNGG MTYEEYRGHF SIWALMKAPL 300 LIGCDVRNMT AETFEILSNK EVIAVNQDPL GVQGRKIQAN GEDDCQQVWS GPLSGDRIVV 360 ALWNRCSEQA TITASWDVIG LESTISVSVR DLWQHKDVTE NASGSFEAQV DAHDCHMYVL 420 TPQTVSHSDV * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02065 | Melibiase | 1.0e-20 | 33 | 221 | 235 | + Melibiase. |
| PLN03231 | PLN03231 | 2.0e-21 | 66 | 331 | 352 | + putative alpha-galactosidase; Provisional |
| PLN02692 | PLN02692 | 9.0e-172 | 49 | 422 | 375 | + alpha-galactosidase |
| PLN02229 | PLN02229 | 0 | 20 | 430 | 411 | + alpha-galactosidase |
| PLN02808 | PLN02808 | 0 | 55 | 423 | 370 | + alpha-galactosidase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 58 | 422 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 59 | 417 | 2 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 58 | 425 | 1 | 389 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 58 | 425 | 1 | 389 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 4do6_B | 0 | 58 | 354 | 1 | 315 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
