Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 486169 |
Family | GH17 |
Protein Properties | Length: 341 Molecular Weight: 37688.1 Isoelectric Point: 8.7184 |
Chromosome | Chromosome/Scaffold: 5 Start: 18311658 End: 18313317 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 27 | 339 | 0 |
VGVCYGRNGDNLPSAAETVELFKQRNIRRVRLYTPDHDVLDALRGSNIEVTLGLPNSYLQSVASSQSQANTWVQTNVMNYVNGVRFRYISVGNEVKISDS YAQFLVPAMINIDRAVLAAGLGGRIKISTAVDMGVLGESYPPSKGSFRGDVMVVMEPIIRFLVSKNSPLLLNLYTYFSYAGNKDQIRLDYALFTAPPGIV LDPPRSYQNLFDAMLDAMHSALERSGGGSLEVVVAETGWPTGGGIDTNIQNAGIYNNNLINHVKNGTPKRPGREIETYIFAMYDEDKKPTPPYVEKFWGL FYPNKQPKYAINF |
Full Sequence |
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Protein Sequence Length: 341 Download |
MDLRFLASLT FLLGLFFANT IPAVRQVGVC YGRNGDNLPS AAETVELFKQ RNIRRVRLYT 60 PDHDVLDALR GSNIEVTLGL PNSYLQSVAS SQSQANTWVQ TNVMNYVNGV RFRYISVGNE 120 VKISDSYAQF LVPAMINIDR AVLAAGLGGR IKISTAVDMG VLGESYPPSK GSFRGDVMVV 180 MEPIIRFLVS KNSPLLLNLY TYFSYAGNKD QIRLDYALFT APPGIVLDPP RSYQNLFDAM 240 LDAMHSALER SGGGSLEVVV AETGWPTGGG IDTNIQNAGI YNNNLINHVK NGTPKRPGRE 300 IETYIFAMYD EDKKPTPPYV EKFWGLFYPN KQPKYAINFG * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 253 | 331 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 8.0e-147 | 27 | 339 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 26 | 339 | 1 | 315 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3f55_C | 0 | 26 | 339 | 1 | 315 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3f55_B | 0 | 26 | 339 | 1 | 315 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3f55_A | 0 | 26 | 339 | 1 | 315 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3em5_D | 0 | 26 | 339 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |