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Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 486481 |
Family | GH1 |
Protein Properties | Length: 580 Molecular Weight: 67129.4 Isoelectric Point: 6.3494 |
Chromosome | Chromosome/Scaffold: 5 Start: 19696635 End: 19700697 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 29 | 504 | 0 |
HSFPDDFIFGTAASAFQYEGATNEGGKSPTIWDHFSRTYPERTKMHNADVAIDFYHRYKDDIKLMKELNMDAFRFSISWSRLIPSGKLKDGVNKEGVKFY KDLIDELLANDIQPSMTLYHWDHPQSLEDEYGGFLSPKIVDDFRDFARICFEEFGDKVKMWTTINEPYIMTVAGYDQGNKAAGRCSKWVNEKCQAGDSST EPYIVSHHTLLAHAAAVEEFRKCKKTSQDGQIGIVLSPRWFEPYHSDSTDDKEAAERAIAFEIGWHLDPVIHGDYPEVVKKYAGNKLPSFTAEESKMLKN SSDFVGINYYTARFAAHLHHIDPEKPRFKTDHHVEWKLTNHSGHIIGPGEERGFLFSHPEGLRKVLNYIKDKYNNMPVYIKENGINDNDDGTKPREEIVK DTFRIEYHKTHFEELHKAIVEDGCDVKGYYAWSLMDNFEWEHGYTARFGLYYVDFVNGLKRYPKDSVKWFKRFLKR |
Full Sequence |
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Protein Sequence Length: 580 Download |
MARGSWFFII LSIISLLANM INSLKLDRHS FPDDFIFGTA ASAFQYEGAT NEGGKSPTIW 60 DHFSRTYPER TKMHNADVAI DFYHRYKDDI KLMKELNMDA FRFSISWSRL IPSGKLKDGV 120 NKEGVKFYKD LIDELLANDI QPSMTLYHWD HPQSLEDEYG GFLSPKIVDD FRDFARICFE 180 EFGDKVKMWT TINEPYIMTV AGYDQGNKAA GRCSKWVNEK CQAGDSSTEP YIVSHHTLLA 240 HAAAVEEFRK CKKTSQDGQI GIVLSPRWFE PYHSDSTDDK EAAERAIAFE IGWHLDPVIH 300 GDYPEVVKKY AGNKLPSFTA EESKMLKNSS DFVGINYYTA RFAAHLHHID PEKPRFKTDH 360 HVEWKLTNHS GHIIGPGEER GFLFSHPEGL RKVLNYIKDK YNNMPVYIKE NGINDNDDGT 420 KPREEIVKDT FRIEYHKTHF EELHKAIVED GCDVKGYYAW SLMDNFEWEH GYTARFGLYY 480 VDFVNGLKRY PKDSVKWFKR FLKRSVGVTN EEEVNEKSRA EGNKTLYEQK CFEESAGFFV 540 SFMATNQSRI EEEKNRCSFD FPRNHFGVLQ GIENPSSFY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 2.0e-138 | 27 | 503 | 481 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 8.0e-147 | 28 | 526 | 501 | + beta-glucosidase | ||
COG2723 | BglB | 7.0e-147 | 31 | 499 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 4.0e-153 | 32 | 498 | 468 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 9.0e-178 | 30 | 504 | 479 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC16092.1 | 0 | 7 | 578 | 5 | 570 | putative beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAG23719.1 | 0 | 1 | 579 | 1 | 577 | beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_001118524.1 | 0 | 7 | 578 | 5 | 590 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191573.1 | 0 | 1 | 579 | 1 | 577 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_850416.1 | 0 | 7 | 578 | 5 | 575 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 26 | 504 | 29 | 505 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3ptq_A | 0 | 26 | 504 | 29 | 505 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3ptm_B | 0 | 26 | 504 | 29 | 505 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3ptm_A | 0 | 26 | 504 | 29 | 505 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3ptk_B | 0 | 26 | 504 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |