Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 486545 |
Family | CE8 |
Protein Properties | Length: 521 Molecular Weight: 57811.2 Isoelectric Point: 9.29 |
Chromosome | Chromosome/Scaffold: 5 Start: 20023004 End: 20025421 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 207 | 505 | 0 |
FVVAQDGSGTHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKVDIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGVSGDGFWARDMTFEN TAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDCHIYGTIDFIFGDATAVFQNCDIFVRRPMDHQGNMITAQGRDDPHSNSGISIQHSR IRAAPEFEAVKGRFKSYLGRPWKKYSRTVLLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTSRRVNWPGFHVLRGQEEASPFTVSRFIQG |
Full Sequence |
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Protein Sequence Length: 521 Download |
MYTFVKVTDL ITIMFLLAIA AVVTASNTAE LDVLEMARTA VVEARASFGS VAVVEATSEV 60 ATSSYYNLGL SECEKLYDVS EARLSKLVVA HENFTVEDVR TWLSGVLANH HTCLDGLVQQ 120 RQGHKPLVHS NVTFVLHEAL AFYKKSRGHM KKTLHGPARE NHGPERPKHG PTRSNHGPGR 180 PNHEPSRPNQ SGGMLVSWNP TSSRADFVVA QDGSGTHRTI NQALAAVSRM GKSRLNRVII 240 YIKAGVYNEK VDIDRHMKNI MLVGDGMDRT IVTNNRNVPD GSTTYGSATF GVSGDGFWAR 300 DMTFENTAGP HKHQAVALRV SSDLSLFYRC SFKGYQDTLF THSLRQFYRD CHIYGTIDFI 360 FGDATAVFQN CDIFVRRPMD HQGNMITAQG RDDPHSNSGI SIQHSRIRAA PEFEAVKGRF 420 KSYLGRPWKK YSRTVLLKTD IDELIDPRGW REWSGSYALS TLYYGEFMNT GAGAGTSRRV 480 NWPGFHVLRG QEEASPFTVS RFIQGDSWIP ITGVPFSAGV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 2.0e-153 | 70 | 520 | 463 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 1.0e-159 | 97 | 519 | 441 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 7.0e-174 | 69 | 520 | 456 | + pectinesterase/pectinesterase inhibitor | ||
PLN02916 | PLN02916 | 0 | 8 | 520 | 515 | + pectinesterase family protein | ||
pfam01095 | Pectinesterase | 0 | 206 | 506 | 301 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB82677.1 | 0 | 1 | 520 | 1 | 496 | pectinesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191632.2 | 0 | 1 | 520 | 1 | 519 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q84R10 | 0 | 1 | 520 | 1 | 519 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
RefSeq | XP_002274478.1 | 0 | 15 | 520 | 8 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511680.1 | 0 | 30 | 520 | 11 | 472 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 206 | 520 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 205 | 520 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-24 | 216 | 478 | 17 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-24 | 216 | 478 | 17 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-23 | 216 | 478 | 17 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |