| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 486726 |
| Family | CE8 |
| Protein Properties | Length: 593 Molecular Weight: 63106.1 Isoelectric Point: 8.9501 |
| Chromosome | Chromosome/Scaffold: 5 Start: 20724680 End: 20726988 |
| Description | VANGUARD 1 homolog 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 282 | 575 | 0 |
| VVAKDGSGQFKTISQAVMACPDKNPGRCIIHIKAGIYNEQVTIPKKKNNIFMFGDGATQTIITFNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTA GPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRI IPDKELEADKLTIKSFLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPWVKVAKSAAEVEAYTVANWV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 593 Download |
| MAVGKVVISV ASLLLVVGVA IGVITYVNKG GGANGDSNAP INSHQKAVQT ICQSTTDQGS 60 CAKTLEPVKS DDPSKLVKAF LMATKDAITK SSNFTASTEG GMGTNMNATS KAVLDYCKKV 120 LTYALEDLET IVEEMGEDLQ QSGTKLDQLK QWLTGVFNYQ TDCLDDIEEV ELKKIMGEGI 180 SNSKVLTSNA IDIFHSVVTA MAQMGVKVDD MKNISIGAGA SGAPARRLLE DTDAKGLPKW 240 FSGKDRKLMA KAGRGAPAGG AGGDDGIGEG GGGGGKIKAT HVVAKDGSGQ FKTISQAVMA 300 CPDKNPGRCI IHIKAGIYNE QVTIPKKKNN IFMFGDGATQ TIITFNRSVK LSPGTTTSLS 360 GTVQVESEGF MAKWIGFKNT AGPLGHQAVA LRVNGDRAVI FNCRFDGYQD TLYVNNGRQF 420 YRNIVVSGTV DFIFGKSATV IQNSLILVRK GSPGQSNYVT ADGNEKGAAM KIGIVLHNCR 480 IIPDKELEAD KLTIKSFLGR PWKKFATTVI IGTEIGDLIK PEGWTEWQGE QNHKTAKYIE 540 FNNRGPGAAT TQRPPWVKVA KSAAEVEAYT VANWVGPANW IQEANVPVQL GL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02990 | PLN02990 | 4.0e-98 | 34 | 587 | 562 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 4.0e-108 | 25 | 592 | 574 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 7.0e-128 | 282 | 576 | 297 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 1.0e-137 | 28 | 592 | 586 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02197 | PLN02197 | 0 | 25 | 592 | 582 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 282 | 592 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 277 | 592 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-24 | 282 | 575 | 7 | 338 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-24 | 282 | 575 | 7 | 338 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-23 | 282 | 575 | 7 | 338 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
