| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 486769 |
| Family | GH3 |
| Protein Properties | Length: 645 Molecular Weight: 70614.4 Isoelectric Point: 6.8976 |
| Chromosome | Chromosome/Scaffold: 5 Start: 20900106 End: 20903042 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 117 | 345 | 0 |
| STRLGIPLLYALDAVHGHSTFIDATIFPHNVGLGATRDPQLVKKIGAITAQEVRATGVAQVFAPCVAVCRDPRWGRCYESYSEDPAVVNMMTESIIDGLQ GNAPYLADPKINVAGCAKHFVGDGGTINGINENNTVADNATLFGIHMPPFEIAVKKGIASIMASYSSLNGVKMHANRAMITDYLKNTLKFQGFVISDWFG IDRITPIPKSNYTYSIEASINAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 645 Download |
| MAAAMYGVRS FFFSAVIVIL FASRFGDATA ADRGYIKYKD PKVAVEERVE DLLIRMTLPE 60 KLGQMCQIDR FNFSITRPTD IFTKYMIGSV LSNPFDTGKN ISERILDINV MKKLSLSTRL 120 GIPLLYALDA VHGHSTFIDA TIFPHNVGLG ATRDPQLVKK IGAITAQEVR ATGVAQVFAP 180 CVAVCRDPRW GRCYESYSED PAVVNMMTES IIDGLQGNAP YLADPKINVA GCAKHFVGDG 240 GTINGINENN TVADNATLFG IHMPPFEIAV KKGIASIMAS YSSLNGVKMH ANRAMITDYL 300 KNTLKFQGFV ISDWFGIDRI TPIPKSNYTY SIEASINAGI DMVMVPWEYK EYLAELTKLV 360 NGGYIPMSRI DDAVRRILRV KFSIGLFENS LADEKLATPE FGSEAHREVG REAVRKSMVL 420 LKNGKTDADK IVPLPKKVKK IVVAGRHANN MGWQCGGFTL TWQGFNGTGE DIPANKKFGF 480 PTGKTRGTTI LEAIQKAVDP TTEVVYVEEP NQDTAKLHAD AAYTIVVVGE TPYAETRGDS 540 PTLGIADPGP DTLRLTCGNG MKCLVILVTG RPLVMEPYLD MIDALAVAWL PGTEGQGVAD 600 VLFGDHPFTG TLPRTWMKHV VQLPMNVGDE YYDPLYPFGY GIKT* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 4.0e-29 | 140 | 642 | 555 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-34 | 418 | 642 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-73 | 49 | 642 | 640 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 9.0e-81 | 56 | 423 | 374 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-90 | 57 | 380 | 327 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF79936.1 | 0 | 35 | 644 | 24 | 618 | exoglucanase precursor [Zea mays] |
| GenBank | ABK95015.1 | 0 | 28 | 644 | 16 | 620 | unknown [Populus trichocarpa] |
| RefSeq | NP_001051275.1 | 0 | 13 | 644 | 7 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130296.1 | 0 | 35 | 644 | 24 | 618 | exoglucanase1 [Zea mays] |
| RefSeq | NP_191830.1 | 0 | 1 | 644 | 1 | 650 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 35 | 644 | 2 | 599 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 1x38_A | 0 | 35 | 644 | 2 | 599 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 1lq2_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
