y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 486805 |
Family | CE10 |
Protein Properties | Length: 359 Molecular Weight: 40341 Isoelectric Point: 7.6012 |
Chromosome | Chromosome/Scaffold: 5 Start: 21013200 End: 21015304 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 67 | 332 | 0 |
DHVDSTTNLLTRIYQPASLLDLTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNAL KWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATKEGVKVLGNILLHPMFGGQERTESEKSLDGKYFVTIQDRDWYWRAFLPEGEDRDHPACNPF GPRGQSLRGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKNGLEVNLLYLKQATIGFYFLPNNDHFHC |
Full Sequence |
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Protein Sequence Length: 359 Download |
MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANTFPV 60 DGVFSFDHVD STTNLLTRIY QPASLLDLTR HGTLELTKPL STTEIVPVLI FFHGGSFTHS 120 SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALKWVK SRVWLQSGKD 180 SNVYVYLAGD SSGGNIAHNV AVRATKEGVK VLGNILLHPM FGGQERTESE KSLDGKYFVT 240 IQDRDWYWRA FLPEGEDRDH PACNPFGPRG QSLRGVNFPK SLVVVAGLDL VQDWQLAYVD 300 GLKKNGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELKKF VHPIEDSQSK SSPLLLTP* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00975 | Thioesterase | 0.002 | 117 | 216 | 108 | + Thioesterase domain. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. | ||
COG2272 | PnbA | 3.0e-7 | 81 | 197 | 137 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 9.0e-10 | 89 | 298 | 223 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 4.0e-35 | 77 | 325 | 251 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-75 | 109 | 323 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG89394.1 | 0 | 1 | 343 | 1 | 342 | gibberellic acid receptor [Gossypium hirsutum] |
GenBank | ACN86356.1 | 0 | 1 | 343 | 1 | 342 | GID1-1 [Gossypium hirsutum] |
RefSeq | NP_191860.1 | 0 | 1 | 358 | 1 | 358 | GID1B (GA INSENSITIVE DWARF1B); hydrolase [Arabidopsis thaliana] |
RefSeq | XP_002271700.1 | 0 | 1 | 341 | 1 | 340 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302813.1 | 0 | 1 | 342 | 1 | 341 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 342 | 8 | 349 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 2zsh_A | 0 | 1 | 342 | 8 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 2 | 342 | 1 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 2 | 342 | 1 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 2 | 342 | 1 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779605 | 342 | 1 | 342 | 0 |
DT574934 | 322 | 19 | 340 | 0 |
ES913054 | 283 | 4 | 286 | 0 |
HO795605 | 343 | 2 | 343 | 0 |
ES790010 | 344 | 1 | 341 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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