| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 486975 |
| Family | AA1 |
| Protein Properties | Length: 586 Molecular Weight: 65564.5 Isoelectric Point: 8.2752 |
| Chromosome | Chromosome/Scaffold: 6 Start: 439853 End: 448606 |
| Description | laccase 8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 25 | 560 | 0 |
| AAIVEHVLHVKDVMVKPLCKEQMIPTVNGSFPGPTINVREGDTLVVHVINNSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPSNNFTYQFDITGQEGT LLWHAHVVNLRATLHGALVIRPRSGRPYPFPKPYKEVPIIFQQWWDTDVRLLELRPAPVSDAYLINGLAGDSYPCSQNRMFNLKVVQGKTYLLRIINAAL NTHLFFKIANHNVTVVAVDAVYTTPYLTDVMILTPGQTVDALLTADQPIGMYYMATIPYFSAIGIPASPDIKPTRGLIVYEGATSSSSPVKPLMPATTDI ATSHRFSSNITSLVGGPHWKPVPRHVDEKMFITMGLGLDPCPSGTKCIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGVYTEDFPDQPPVKFDYTK FQQRTNSDMKMMFPERKTSVKTIRFNSTVEIVLQNTAILSPESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNP GVWLFHCHMDAHLPYGIMNAFIVQNGPTPETSLPSP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MPRLHHYLPI QTFVVLLLFS SIASAAIVEH VLHVKDVMVK PLCKEQMIPT VNGSFPGPTI 60 NVREGDTLVV HVINNSTYNV TIHWHGVFQL KSVWMDGANM ITQCPIQPSN NFTYQFDITG 120 QEGTLLWHAH VVNLRATLHG ALVIRPRSGR PYPFPKPYKE VPIIFQQWWD TDVRLLELRP 180 APVSDAYLIN GLAGDSYPCS QNRMFNLKVV QGKTYLLRII NAALNTHLFF KIANHNVTVV 240 AVDAVYTTPY LTDVMILTPG QTVDALLTAD QPIGMYYMAT IPYFSAIGIP ASPDIKPTRG 300 LIVYEGATSS SSPVKPLMPA TTDIATSHRF SSNITSLVGG PHWKPVPRHV DEKMFITMGL 360 GLDPCPSGTK CIGPLGQRYA GSLNNRTFMI PERISMQEAY FYNISGVYTE DFPDQPPVKF 420 DYTKFQQRTN SDMKMMFPER KTSVKTIRFN STVEIVLQNT AILSPESHPM HLHGFNFYVL 480 GYGFGNYDPI RDARKLNLFN PQMHNTVGVP PGGWVVLRFI ANNPGVWLFH CHMDAHLPYG 540 IMNAFIVQNG PTPETSLPSP PSNLPQCTRD PTIYDSRTTN TDLSY* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-47 | 33 | 149 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 2.0e-66 | 14 | 546 | 568 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-77 | 6 | 541 | 580 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-82 | 27 | 541 | 555 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 25 | 550 | 532 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_195724.1 | 0 | 1 | 585 | 1 | 584 | LAC8 (laccase 8); laccase [Arabidopsis thaliana] |
| RefSeq | NP_195725.1 | 0 | 1 | 585 | 1 | 586 | laccase family protein / diphenol oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002308196.1 | 0 | 1 | 567 | 1 | 562 | laccase 110a [Populus trichocarpa] |
| RefSeq | XP_002322939.1 | 0 | 20 | 567 | 17 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333273.1 | 0 | 20 | 567 | 17 | 568 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 25 | 545 | 1 | 521 | A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 |
| PDB | 1asq_A | 0 | 25 | 545 | 1 | 521 | A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 |
| PDB | 1asp_B | 0 | 25 | 545 | 1 | 521 | A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 |
| PDB | 1asp_A | 0 | 25 | 545 | 1 | 521 | A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 |
| PDB | 1aso_B | 0 | 25 | 545 | 1 | 521 | A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 |
