| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 487274 |
| Family | GH3 |
| Protein Properties | Length: 669 Molecular Weight: 72620.9 Isoelectric Point: 6.784 |
| Chromosome | Chromosome/Scaffold: 6 Start: 1685501 End: 1689698 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 107 | 342 | 0 |
| LVSRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRDPDLVKRIGAATAVEVRATGIPYTFAPCIAVCRDPRWGRCYESYSEDHKVVEDMTDVILGLQ GEPPSNYKHGVPFVGGRDKVAACAKHYVGDGGTTRGVNENNTVTDLHGLLSVHMPAYADAIYKGVSTVMVSYSSWNGEKMHANTELITGYLKGTLKFKGF VISDWQGVDKISSPPHTHYTASVRAAIQAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 669 Download |
| MSRDSVRIVG LLLWMCVWVS CYGDGEYVLY KDPKQAVSDR VADLFGRMTL EEKIGQMVQI 60 DRSVATVNIM RDYFIGSVLS GGGSAPLPEA TAQNWVDMIN EYQKGALVSR LGIPMIYGID 120 AVHGHNNVYN ATIFPHNVGL GATRDPDLVK RIGAATAVEV RATGIPYTFA PCIAVCRDPR 180 WGRCYESYSE DHKVVEDMTD VILGLQGEPP SNYKHGVPFV GGRDKVAACA KHYVGDGGTT 240 RGVNENNTVT DLHGLLSVHM PAYADAIYKG VSTVMVSYSS WNGEKMHANT ELITGYLKGT 300 LKFKGFVISD WQGVDKISSP PHTHYTASVR AAIQAGIDMV MVPFNFTEFV NDLTSLVKNN 360 SIPVTRIDDA VRRILLVKFT MGLFENPLAD YSFSNELGSQ AHRDLAREAV RKSLVLLKNG 420 NKTNPMLPLP RKTSKILVAG THADNLGYQC GGWTITWQGF SGNKNTRGTT LLGAVKSAVD 480 QSTEVVFREN PDAEFIKSNN FSYAIIAVGE PPYAETAGDS DKLTMLDPGP AIISSTCQAV 540 KCVVVVISGR PIVMEPYVAS IEALVAAWLP GTEGQGITDA LFGDHGFSGK LPVTWFRNTE 600 QLPMSYGDSH YDPLFAYGSG LETESVASIV ARSTSASATS TKPCLFTVLV SATLCLFIFP 660 SLSRLLRR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 3.0e-37 | 106 | 617 | 568 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-45 | 414 | 621 | 226 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-79 | 33 | 621 | 661 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-85 | 49 | 375 | 331 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 5.0e-86 | 48 | 456 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC42711.1 | 0 | 98 | 665 | 1 | 568 | unknown protein [Arabidopsis thaliana] |
| EMBL | CBI24995.1 | 0 | 48 | 658 | 1 | 614 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_680141.2 | 0 | 1 | 665 | 1 | 665 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002262992.1 | 0 | 26 | 658 | 24 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002514453.1 | 0 | 12 | 650 | 9 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 26 | 625 | 1 | 601 | A Chain A, Crystal Structure Of A Small Single-Stranded Dna Binding Protein From Mycoplasma Pneumoniae |
| PDB | 1iex_A | 0 | 26 | 625 | 1 | 601 | A Chain A, Crystal Structure Of A Small Single-Stranded Dna Binding Protein From Mycoplasma Pneumoniae |
| PDB | 1iew_A | 0 | 26 | 625 | 1 | 601 | A Chain A, Crystal Structure Of A Small Single-Stranded Dna Binding Protein From Mycoplasma Pneumoniae |
| PDB | 1iev_A | 0 | 26 | 625 | 1 | 601 | A Chain A, Crystal Structure Of A Small Single-Stranded Dna Binding Protein From Mycoplasma Pneumoniae |
| PDB | 1ieq_A | 0 | 26 | 625 | 1 | 601 | A Chain A, Crystal Structure Of A Small Single-Stranded Dna Binding Protein From Mycoplasma Pneumoniae |
