Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 487283 |
Family | CE8 |
Protein Properties | Length: 572 Molecular Weight: 63049.4 Isoelectric Point: 8.9496 |
Chromosome | Chromosome/Scaffold: 6 Start: 1729646 End: 1731710 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 265 | 556 | 0 |
IVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKKKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAG PTKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQNCEILPRRPMEGQQNTITAQGRKDPNQNTGISIHNCTIKP LDNLTDIQTFLGRPWKDFSTTVIMKSYMDKFINPKGWLPWTGYAAPYTIFYAEYLNSGPGASTKNRVKWKGLKTSLTNKEANKFTVKPFIDG |
Full Sequence |
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Protein Sequence Length: 572 Download |
MSSYGRLDEH EQSKLEASRK TKKRIAIIAI SSIVLVCIVV GAIVGTTAYD NGKKSPTESN 60 GEPISVSVKA VCDVTLHKDK CFETIGTAPN ASQLNPEELF KYAVKITITE LSKVLDGFSN 120 GEHMDNATSA AMGACVELIG LAVDQLNETM TSMKDKTTSP LKSVDDLRTW LSSVETYQET 180 CMDALVEANK PGLTTFGENH LKNSTEMTSN ALAIITWLGK IADTVKFRRR RLMATGDAKV 240 VVADLPMMEG RRLLESGDLR KKATIVVAKD GSGKYRTIGE ALAEVEEKNE KPTIIYVKKG 300 VYLENVRVEK KKWNVVMVGD GQSKTIVSAG LNFIDGTPTF ETATFAVFGK GFMARDMGFI 360 NTAGPTKHQA VALMVSADLS VFYKCTMDAF QDTMYAHAQR QFYRDCVILG TVDFIFGNAA 420 VVFQNCEILP RRPMEGQQNT ITAQGRKDPN QNTGISIHNC TIKPLDNLTD IQTFLGRPWK 480 DFSTTVIMKS YMDKFINPKG WLPWTGYAAP YTIFYAEYLN SGPGASTKNR VKWKGLKTSL 540 TNKEANKFTV KPFIDGNNWL PATKVPFKSD F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 1.0e-157 | 36 | 567 | 543 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 3.0e-168 | 34 | 568 | 564 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 1 | 571 | 575 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 569 | 585 | + pectinesterase | ||
pfam01095 | Pectinesterase | 0 | 265 | 557 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO42295.1 | 0 | 1 | 571 | 1 | 564 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_187682.1 | 0 | 2 | 569 | 3 | 559 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_196115.1 | 0 | 1 | 571 | 1 | 564 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002316458.1 | 0 | 1 | 568 | 4 | 566 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 3 | 568 | 6 | 570 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 265 | 567 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 263 | 567 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-18 | 266 | 561 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-18 | 266 | 561 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-18 | 266 | 561 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |