Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 487284 |
Family | CE8 |
Protein Properties | Length: 617 Molecular Weight: 67198.9 Isoelectric Point: 7.4234 |
Chromosome | Chromosome/Scaffold: 6 Start: 1731902 End: 1734681 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 300 | 595 | 0 |
VTVGPYETDNFSTITEAVAAAPNNTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRN TAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCT IGAAPDLAADPNSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLLNLAEAMNFTVYNFT |
Full Sequence |
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Protein Sequence Length: 617 Download |
MQSQHFSSSL LFLALLSLSW ALLVSPTQPP PAWPAPTQPP SEPPTSPPSQ SPSLPPSQPP 60 TPPPSQSPSQ PSPLPPNIAC KSTPYPKLCR TILSAVKSSP SDPYHYGKFT MKQCLKQARR 120 LSKVINRFAH RVEDDPGAST VEEVSAVADC GELAQLSVDY LETVTEELKA AELMTAALVD 180 RVTSLLGGVV TNQQTCLDGL VDAKSGFATA IGTPLGNLTR LYSVSLGLVS HALNRNLKRY 240 KGSKGKIFGG GNKPVREPLE TLIKVLRKTC DKSKDCRKAD RNLGELGETS GGSILVREAV 300 TVGPYETDNF STITEAVAAA PNNTFPEQGY FVIYARAGLY EEYVVISNKK RNIMLIGDGI 360 NKTIISGNHS FIDGWTTYNS STFAVVGDRF VAVDVTFRNT AGPEKHQAVA VRNNADGSTF 420 YRCSFEGYQD TLYVHSLRQF YRECDIYGTI DFIFGNAAAI FQNCNIYARK PMANQKNAVT 480 AHGRTDPNQK TGISIINCTI GAAPDLAADP NSTMTFLGRP WKPYSRTVYI QSYISDVVQP 540 VGWLEWNGTT GLDTISYGEY DNFGPGADTS KRVQWSGYSL LNLAEAMNFT VYNFTLGDTW 600 LPQTDIPFYG GLLHTE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 1.0e-140 | 129 | 612 | 491 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 8.0e-149 | 145 | 612 | 476 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 77 | 613 | 537 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 0 | 79 | 613 | 540 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 300 | 598 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF19577.1 | 0 | 1 | 616 | 1 | 617 | AC011708_20 putative pectinesterase [Arabidopsis thaliana] |
DDBJ | BAH20370.1 | 0 | 167 | 616 | 1 | 450 | AT3G10720 [Arabidopsis thaliana] |
RefSeq | NP_187683.2 | 0 | 1 | 616 | 3 | 619 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_196116.1 | 0 | 4 | 616 | 2 | 624 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | XP_002515774.1 | 0 | 78 | 613 | 34 | 568 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 298 | 612 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 307 | 612 | 12 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-23 | 310 | 602 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-23 | 310 | 602 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-23 | 310 | 602 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |