| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 487672 |
| Family | GH27 |
| Protein Properties | Length: 431 Molecular Weight: 48231.4 Isoelectric Point: 7.756 |
| Chromosome | Chromosome/Scaffold: 6 Start: 3287981 End: 3290952 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 246 | 349 | 1.3e-25 |
| DMNEVYAEHARPGGWNDPDMLEVGNGGMTKEEYIVHFSIWAISKAPLLLGCDIRNMTKETVEIVANKEVIAINQEKESSCRSTRCQAKKVRMEGDLEVWA GPLS | |||
| GH27 | 153 | 249 | 9.6e-30 |
| MPGSLGYEEHDAKTFAEWGIDYLKYDNCNNDGSKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVGNSWRTTNDIKDTWLSMISIADMNE | |||
| GH27 | 42 | 150 | 2.3e-33 |
| EILRRHLLTNGLGVTPPMGWNSWNHFSCNIDEKMIKETADALVTTGLSKLGYKYVNIDDCWAEISRDSKGSLVPKKSTFPSGIKALADYVHSKGLKLGIY SDAGYFTCS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 431 Download |
| MARTRAMVIK MSTLMILISL MVMNMVESSR SVNKVNNGDD SEILRRHLLT NGLGVTPPMG 60 WNSWNHFSCN IDEKMIKETA DALVTTGLSK LGYKYVNIDD CWAEISRDSK GSLVPKKSTF 120 PSGIKALADY VHSKGLKLGI YSDAGYFTCS KTMPGSLGYE EHDAKTFAEW GIDYLKYDNC 180 NNDGSKPTVR YPVMTRALMK SGRPIFHSLC EWGDMHPALW GSPVGNSWRT TNDIKDTWLS 240 MISIADMNEV YAEHARPGGW NDPDMLEVGN GGMTKEEYIV HFSIWAISKA PLLLGCDIRN 300 MTKETVEIVA NKEVIAINQE KESSCRSTRC QAKKVRMEGD LEVWAGPLSG YRVALLLLNR 360 GPSRTLITAL WDDIEIPANS IVEARDLWQH KTLKQKFVGN LTATVDSHAC KLYILKQSNL 420 LPEIHKERVN * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02065 | Melibiase | 8.0e-25 | 25 | 295 | 345 | + Melibiase. | ||
| PLN03231 | PLN03231 | 6.0e-26 | 57 | 318 | 348 | + putative alpha-galactosidase; Provisional | ||
| PLN02692 | PLN02692 | 0 | 2 | 419 | 418 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 0 | 42 | 415 | 374 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 28 | 415 | 391 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13199.1 | 0 | 1 | 416 | 1 | 407 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| GenBank | ABC55266.1 | 0 | 10 | 416 | 8 | 410 | acid alpha galactosidase 1 [Cucumis sativus] |
| RefSeq | NP_196455.1 | 0 | 1 | 416 | 1 | 407 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002316426.1 | 0 | 45 | 416 | 1 | 366 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513158.1 | 0 | 19 | 416 | 18 | 409 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 49 | 415 | 1 | 359 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 51 | 412 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 49 | 421 | 1 | 390 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 49 | 421 | 1 | 390 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3lrl_A | 0 | 51 | 391 | 24 | 400 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
