| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 487889 |
| Family | GH3 |
| Protein Properties | Length: 797 Molecular Weight: 87496.4 Isoelectric Point: 6.0276 |
| Chromosome | Chromosome/Scaffold: 6 Start: 4216382 End: 4219391 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 74 | 344 | 0 |
| ASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIVSAASFNRTLWYEIGSAVAVEARAMYNGGQAGLTFWAPNINLFRDPRWGRGQETPG EDPKVVSEYGVEFVRGFQEKKKRKVLKTRFGSDNVDDDARYDDDADGKLMLSACCKHFTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIKDGKA SCLMCSYNAVNGVPACAQGDLLQKARVEWGFDGYITSDCDAVATIFEYQGYTKSPEEAVADAIKAGVDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 797 Download |
| MNHQLTLISL VFFTSAIAET FKNLDSHPQF PCKPPHFSSY PFCNVSLSIK QRAISLVSLL 60 TLPEKIGQLS TTAASVPRLG IPPYEWWSES LHGLADNGPG VSFNGSISAA TSFPQVIVSA 120 ASFNRTLWYE IGSAVAVEAR AMYNGGQAGL TFWAPNINLF RDPRWGRGQE TPGEDPKVVS 180 EYGVEFVRGF QEKKKRKVLK TRFGSDNVDD DARYDDDADG KLMLSACCKH FTAYDLEKWG 240 NFTRYDFNAV VTEQDMEDTY QPPFETCIKD GKASCLMCSY NAVNGVPACA QGDLLQKARV 300 EWGFDGYITS DCDAVATIFE YQGYTKSPEE AVADAIKAGV DINCGTYMLR NTQSAIEQGK 360 VSEELVDRAL LNLFAVQLRL GLFDGDPRGG HYGKLGSNDI CSSDHRKLAL EAARQGIVLL 420 KNDYKLLPLN KNHVSSLAIV GPMANNISNM GGTYTGKPCQ RKTLFTELLE YVKKTSYASG 480 CSDVSCVSDT GFGEAVAIAK GADFVIVVAG LDLSQETEDK DRFSLSLPGK QKDLVSSVAA 540 VSKKPVILVL TGGGPVDVTF AKTDPRIGSI IWIGYPGETG GQALAEIIFG DFNPGGRLPI 600 TWYPESFADV PMSDMHMRAD SSRGYPGRTY RFYTGPQVYS FGTGLSYTKF DYKIISAPIR 660 LSLSELLPQQ SSHKKQLLQH GEEQLQYIQL DDVMVNSCES LRFNVRVNVR NTGEIDGSHV 720 LMLFSKMARV LSGVPEKQLI GFDRVHIRSN EMMETVFVID PCKYLSVAND VGKRVIPLGI 780 HALFLGDLQH SLSVEF* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 3.0e-54 | 417 | 648 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 2.0e-57 | 71 | 455 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-61 | 61 | 369 | 340 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 5.0e-78 | 111 | 761 | 699 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 1 | 796 | 797 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC41913.1 | 0 | 62 | 796 | 2 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
| EMBL | CBI25718.1 | 0 | 26 | 796 | 26 | 768 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_196618.1 | 0 | 1 | 796 | 1 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264031.1 | 0 | 26 | 796 | 26 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299457.1 | 0 | 26 | 796 | 26 | 779 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 111 | 761 | 91 | 698 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3u48_A | 0 | 111 | 761 | 91 | 698 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3u4a_B | 0 | 111 | 761 | 91 | 698 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3u4a_A | 0 | 111 | 761 | 91 | 698 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 2x41_A | 5e-39 | 51 | 652 | 14 | 605 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
