| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 488616 |
| Family | GH5 |
| Protein Properties | Length: 528 Molecular Weight: 59417.6 Isoelectric Point: 8.5608 |
| Chromosome | Chromosome/Scaffold: 6 Start: 7231492 End: 7234404 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 36 | 350 | 2.09999e-41 |
| IVNKKGHRVKLACANWPSHLKPVVAEGLSSQPMDSISKKIKDMGFNCVRLTWPLELMINDTLAFNVTVKQSFERYGLDHELQGIYTHNPSIVNIPLINAF QAVVYSLGRHDVMVILDNHKTVPGWCCSNNDPDAFFGDPKFNPDLWMLGLKKMATIFMNVNNVVGMSLRNELRGYNHTAKDWYKYMQKGAEAVHTSNPNV LVILSGLNFDADLSFLQDRPVNLSFKKKLVLELHWYSFTDGTGQWKSHNVNDFCSQMFAKEHRTGGFVLEQGFPLFLSEFGTDQRGGDFEGNRYMSCMLA WAAEKDIDWAVWALT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MAKTISPLTL VLFLLLSSIS LTLATDYPLF TKSRWIVNKK GHRVKLACAN WPSHLKPVVA 60 EGLSSQPMDS ISKKIKDMGF NCVRLTWPLE LMINDTLAFN VTVKQSFERY GLDHELQGIY 120 THNPSIVNIP LINAFQAVVY SLGRHDVMVI LDNHKTVPGW CCSNNDPDAF FGDPKFNPDL 180 WMLGLKKMAT IFMNVNNVVG MSLRNELRGY NHTAKDWYKY MQKGAEAVHT SNPNVLVILS 240 GLNFDADLSF LQDRPVNLSF KKKLVLELHW YSFTDGTGQW KSHNVNDFCS QMFAKEHRTG 300 GFVLEQGFPL FLSEFGTDQR GGDFEGNRYM SCMLAWAAEK DIDWAVWALT GVYYFREGKR 360 GVLEAYGMLD ANWHNVHNYT YLRRLSVIQP PHKGPGIKHN HHKKIFHPLT GLCLVRKSSC 420 YESELMLGPC TKGEPWSYSH GGILEIKGGH KSCLEGETAV GRSVKLGKKC TKIMQISATK 480 MHLSLKTNDG SLVCLDVDSD NNVVANSCKC LTGDITCEPA SQWFKIF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 3.0e-17 | 67 | 351 | 292 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 27 | 527 | 3 | 503 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | NP_172772.2 | 0 | 27 | 527 | 33 | 533 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197172.1 | 0 | 12 | 527 | 9 | 488 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197252.1 | 0 | 26 | 527 | 25 | 526 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002312657.1 | 0 | 24 | 526 | 7 | 508 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0000000000001 | 31 | 317 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0000000000001 | 31 | 317 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.000000000002 | 31 | 317 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.000000000002 | 31 | 317 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 2zun_C | 0.00000006 | 44 | 385 | 61 | 408 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
