| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 488959 |
| Family | GH17 |
| Protein Properties | Length: 321 Molecular Weight: 35673.5 Isoelectric Point: 6.5129 |
| Chromosome | Chromosome/Scaffold: 6 Start: 8722983 End: 8723974 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 33 | 319 | 0 |
| VGLNYGLLGDNLPSPSNVIKFYKSQNVAKIRIFEPNKDVLNALRGNREIGVTVGIKNEDLAALAANKDTVKSWFATNIDPYIADVNITFITVGNQAIPGD IYGPHVLPVEKSPDLDQHHGHYHEPSCVETTFHRSFNTPSTPIFVNIYPYYFYASDPKNVPLEYTNFNTDQIVVKDGALKYSNLFDAIFDAFLWAMEKEG VKGLPLVVSETGWPSAGNGGMTTPALQYTYIGNFVKHVASGKGTPKRPNSRIDGYIFETYNENQKPVGIYQHFGLYDPTEPTPMYKL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 321 Download |
| MDYSKKLFLV LLSCVALIIS YNKVDSLSTT SVVGLNYGLL GDNLPSPSNV IKFYKSQNVA 60 KIRIFEPNKD VLNALRGNRE IGVTVGIKNE DLAALAANKD TVKSWFATNI DPYIADVNIT 120 FITVGNQAIP GDIYGPHVLP VEKSPDLDQH HGHYHEPSCV ETTFHRSFNT PSTPIFVNIY 180 PYYFYASDPK NVPLEYTNFN TDQIVVKDGA LKYSNLFDAI FDAFLWAMEK EGVKGLPLVV 240 SETGWPSAGN GGMTTPALQY TYIGNFVKHV ASGKGTPKRP NSRIDGYIFE TYNENQKPVG 300 IYQHFGLYDP TEPTPMYKLY * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0006 | 237 | 308 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-66 | 33 | 319 | 314 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM62473.1 | 0 | 1 | 320 | 1 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
| RefSeq | NP_174592.1 | 0 | 4 | 320 | 5 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_197533.1 | 0 | 1 | 320 | 1 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197534.1 | 0 | 5 | 320 | 6 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197556.1 | 0 | 2 | 310 | 3 | 336 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 33 | 319 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 33 | 312 | 2 | 307 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 33 | 312 | 2 | 307 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 33 | 312 | 2 | 307 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 33 | 312 | 2 | 307 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
