| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 489003 |
| Family | GH3 |
| Protein Properties | Length: 631 Molecular Weight: 68465.1 Isoelectric Point: 8.8983 |
| Chromosome | Chromosome/Scaffold: 6 Start: 8881553 End: 8884160 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 111 | 344 | 0 |
| LSTRLGIPIIYGIDAVHGHNTVYNATIFPHNIGLGVTRDPGLVKRIGEATALEVRATGIQYVFAPCIAVCRDPRWGRCYESYSEDHKIVQQMTEIIPGLQ GDLPTGQKGVPYVAGKTKVAACAKHFVGDGGTLRGMNANNTVINTNGLLGIHMPAYYDAVKKGVATVMVSYSSINGLKMHANKKLITDFLKNKLKFRGIV ISDYLGVDQINTPLGANYSHSVYAAITAGLDMFM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 631 Download |
| MGSSSYLLLG LLLLCCTVAA NKEPLENAKY KDPKEPLGVR IKNLMSHMTL EEKIGQMVQV 60 ERVNATTEVM KKYFGIMFLG SVFSGGGSVP TPYASPEAWV NMVNEIQKKA LSTRLGIPII 120 YGIDAVHGHN TVYNATIFPH NIGLGVTRDP GLVKRIGEAT ALEVRATGIQ YVFAPCIAVC 180 RDPRWGRCYE SYSEDHKIVQ QMTEIIPGLQ GDLPTGQKGV PYVAGKTKVA ACAKHFVGDG 240 GTLRGMNANN TVINTNGLLG IHMPAYYDAV KKGVATVMVS YSSINGLKMH ANKKLITDFL 300 KNKLKFRGIV ISDYLGVDQI NTPLGANYSH SVYAAITAGL DMFMGSSNLT KLIDELTSQV 360 KRKLIPMSRI DDAVKRILRV KFTMGLFENP IADHSLANQL GSKEHRELAR EAVRKSLVLL 420 KNGENADKPL LPLPKKANKI LVAGTHADNL GYQCGGWTIT WQGLNGNNLT IGTTILTAVK 480 NTVDPKTQVI YNQNPDTNFV KSGDFDYSIV VIGEKPYAEG FGDSTNLTIS EPGTSTIENV 540 CASVKCVVVV VSGRPVVMQP YISNIDALVA AWLPGTEGQG VADVLFGDYG FTGKLARTWF 600 KTVDQLPMNV GDPHYDPLYP FGFGLITNPN * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 3.0e-12 | 564 | 625 | 84 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-36 | 417 | 625 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 3.0e-56 | 41 | 491 | 476 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 2.0e-86 | 48 | 475 | 438 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-86 | 49 | 380 | 336 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 29 | 629 | 27 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| EMBL | CAA07070.1 | 0 | 1 | 630 | 1 | 626 | beta-D-glucosidase [Tropaeolum majus] |
| RefSeq | NP_197594.2 | 0 | 1 | 630 | 1 | 626 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | NP_197595.2 | 0 | 1 | 629 | 1 | 621 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002313632.1 | 0 | 1 | 629 | 1 | 624 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 30 | 628 | 5 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1iex_A | 0 | 30 | 628 | 5 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1iew_A | 0 | 30 | 628 | 5 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1iev_A | 0 | 30 | 628 | 5 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1ieq_A | 0 | 30 | 628 | 5 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
