| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 489005 |
| Family | GH3 |
| Protein Properties | Length: 625 Molecular Weight: 67851.7 Isoelectric Point: 9.5567 |
| Chromosome | Chromosome/Scaffold: 6 Start: 8884957 End: 8888769 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 104 | 337 | 0 |
| STRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGVTRDPNLLKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDYRIVKQMTEIIPGLQG DLPTKRKGVPFVGGKTKVAACAKHFVGDGGTVRGIDENNTVIDSKGLFGIHMPGYYNAVNKGVATIMVSYSAWNGLRMHANKELVTGFLKNKLKFRGFVI SDWQGIDRITTPPHLNYSYSVYAGISAGIDMIMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 625 Download |
| MGTLSKVLCL VLLCCAVAAA EGTLKYKDPK QPLGARIRDL MNRMTLQEKI GQMVQIERSV 60 ATPEVMKKYF IGSVLSGGGS VPSEKATPET WVNMVNEIQK ASLSTRLGIP MIYGIDAVHG 120 HNNVYGATIF PHNVGLGVTR DPNLLKRIGA ATALEVRATG IPYAFAPCIA VCRDPRWGRC 180 YESYSEDYRI VKQMTEIIPG LQGDLPTKRK GVPFVGGKTK VAACAKHFVG DGGTVRGIDE 240 NNTVIDSKGL FGIHMPGYYN AVNKGVATIM VSYSAWNGLR MHANKELVTG FLKNKLKFRG 300 FVISDWQGID RITTPPHLNY SYSVYAGISA GIDMIMVPYN YTEFIDEINS QIQKKLIPLS 360 RIDDAVKRIL RVKFTMGLFE EPLADLSFAN QLGSKEHREL AREAVRKSLV LLKNGKTGAK 420 PLLPLPKKTG KILVAGTHAD NLGYQCGGWT ITWQGLNGND HTVGTTILAA VKNTVAPTTQ 480 VVYNQNPDAN FVKSGKFDYA IVVVGEPPYA EMFGDTTNLT ISAPGPSTIG NVCGSVKCVV 540 VVVSGRPVVI QPYVSTIDAL VAAWLPGTEG QGVADALFGD YGFTGKLART WFKSVKQLPM 600 NVGDLHYDPL YPFGFGLTTK PYKM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 1.0e-10 | 558 | 618 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 1.0e-31 | 32 | 622 | 653 | + Probable beta-xylosidase; Provisional | ||
| PRK15098 | PRK15098 | 1.0e-52 | 29 | 510 | 497 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 6.0e-76 | 44 | 477 | 441 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-87 | 45 | 372 | 332 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 24 | 621 | 26 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| GenBank | ABK95015.1 | 0 | 7 | 623 | 8 | 624 | unknown [Populus trichocarpa] |
| EMBL | CAA07070.1 | 0 | 10 | 621 | 12 | 625 | beta-D-glucosidase [Tropaeolum majus] |
| RefSeq | NP_197595.2 | 0 | 1 | 624 | 1 | 624 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002313632.1 | 0 | 1 | 623 | 1 | 626 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1iex_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1iew_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1iev_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1ieq_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
