| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 489446 |
| Family | GH1 |
| Protein Properties | Length: 542 Molecular Weight: 61210.4 Isoelectric Point: 5.0064 |
| Chromosome | Chromosome/Scaffold: 6 Start: 11788904 End: 11801042 |
| Description | thioglucoside glucohydrolase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 41 | 512 | 0 |
| GSFEKDFIFGVASSAYQVEGGRGRGLNIWDGFTHRYPEKGGADLGNGDTTCDSYTNWQKDIDVMDELNATGYRFSFAWSRILPKGKRSRGVNEGGINYYN RLINNTIARNITPFVTLFHWDLPQTLQDEYNGFLNRTIIDDFKDYADLCFELFGDRVKNWITINQLYTVPTRGYALGTDAPGRCSPKIDERCPGGNSSTE PYLVAHNQLLAHAAAVDVYRTKYKQDQGGKIGPVMITRWFLPYDDTPESKEATERAKEFFHGWFMGPLTEGKYPDIMREYVGDRLPEFNETEAALVKGSY DFLGLNYYVTQYAQNNDTIVPPDVHTALMDSRATLTSTNATGHAPGPPFNAGSYYYPKGIYYVMEYFKNKYGDPLIYITENGISTPGDESFDEAVADYKR IDYLCSHLCFLSKVIKEKAVNVKGYFAWALGDNYEFCNGFTVRFGLSYVDFTNVTGDRDLKASGKWYQQFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 542 Download |
| MKLLGFSLAI LLAVVTCKAE EFTCEENEPF TCNQTKLFNS GSFEKDFIFG VASSAYQVEG 60 GRGRGLNIWD GFTHRYPEKG GADLGNGDTT CDSYTNWQKD IDVMDELNAT GYRFSFAWSR 120 ILPKGKRSRG VNEGGINYYN RLINNTIARN ITPFVTLFHW DLPQTLQDEY NGFLNRTIID 180 DFKDYADLCF ELFGDRVKNW ITINQLYTVP TRGYALGTDA PGRCSPKIDE RCPGGNSSTE 240 PYLVAHNQLL AHAAAVDVYR TKYKQDQGGK IGPVMITRWF LPYDDTPESK EATERAKEFF 300 HGWFMGPLTE GKYPDIMREY VGDRLPEFNE TEAALVKGSY DFLGLNYYVT QYAQNNDTIV 360 PPDVHTALMD SRATLTSTNA TGHAPGPPFN AGSYYYPKGI YYVMEYFKNK YGDPLIYITE 420 NGISTPGDES FDEAVADYKR IDYLCSHLCF LSKVIKEKAV NVKGYFAWAL GDNYEFCNGF 480 TVRFGLSYVD FTNVTGDRDL KASGKWYQQF INVTTEDSTN QDLLRSSVSV KNRDRKSLAD 540 A* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 4.0e-115 | 38 | 511 | 482 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 1.0e-120 | 38 | 525 | 494 | + beta-glucosidase | ||
| COG2723 | BglB | 2.0e-123 | 43 | 511 | 480 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 2.0e-131 | 45 | 507 | 468 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 39 | 512 | 482 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL06896.1 | 0 | 1 | 541 | 1 | 541 | AT5g26000/T1N24_7 [Arabidopsis thaliana] |
| GenBank | AAL25596.1 | 0 | 1 | 541 | 1 | 541 | AT5g26000/T1N24_7 [Arabidopsis thaliana] |
| EMBL | CAH40799.1 | 0 | 18 | 497 | 1 | 480 | thioglucoside glucohydrolase [Arabidopsis thaliana] |
| EMBL | CAH40827.1 | 0 | 18 | 497 | 1 | 479 | thioglucoside glucohydrolase [Arabidopsis lyrata subsp. lyrata] |
| RefSeq | NP_851077.1 | 0 | 1 | 541 | 1 | 541 | TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1myr_A | 0 | 20 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 2wxd_M | 0 | 20 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9d_M | 0 | 20 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9b_M | 0 | 20 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1e73_M | 0 | 20 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
