| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 489456 |
| Family | GH51 |
| Protein Properties | Length: 699 Molecular Weight: 77953.7 Isoelectric Point: 4.4415 |
| Chromosome | Chromosome/Scaffold: 6 Start: 11863043 End: 11868908 |
| Description | alpha-L-arabinofuranosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 218 | 694 | 0 |
| ARLQFTTTKKGSIWFDQVSAMPMDTYKKDESDIVALMEIDEVEGKNDSRLQICKTKEEEEEQTTNDLFQMMVDLKPRFIRFPGGCFVEGEWLGNAFRWKE TVGAWEERPGHYGDVWKYWTDDGLGHFEFFQLAEDIGAAPVWVFNNGISHNDQVETENVKPFVQEAIDGIEFARGDPQSTWGSVRAAMGHPEPFELKYVA VGNEDCFKSYYRGNYLEFYDAIKKAYPDIKIISNCDASFKPLDHPADYFDYHIYTLAKDLFSRSHDFDNTPRNGPKAFVSEYAVNKTDANNGNLLAALGE AAFLLGLEKNSDIVGMVSYAPLFVNTNDKRWIPDAIVFNSSHLYGTPSYWVQQFFTESSGATLLNSTLKGNSFSIEASAISFQANGKTYIQIKAVNFGEE SVNLKVTVTGLIAKFYGSKKKVLTSANVMDENSFSTPEMIVPQESLLEMTEEEDLMFVLPPHSFSSFDLLKQSENII | |||
| Full Sequence |
|---|
| Protein Sequence Length: 699 Download |
| METSWRFLKS VCILSFLIGA CSVYQSLCLV DAQADAIVTL QVDASNMTRR PIPETLFGIF 60 FEEINHAGAG GLWAELVSNR GFEAGGQTIP SNIWPWSIIG DESSIYVVTD RSSCFERNKI 120 ALKMEVLCDS NGSSNCCPSG GVGIYNPGYW GMNIEEAKKY KVVFYVRSTG DIDVSVSFTS 180 SNGSLTLASE NIIALASDVS NWTKKEMLLE ANGTDNGARL QFTTTKKGSI WFDQVSAMPM 240 DTYKKDESDI VALMEIDEVE GKNDSRLQIC KTKEEEEEQT TNDLFQMMVD LKPRFIRFPG 300 GCFVEGEWLG NAFRWKETVG AWEERPGHYG DVWKYWTDDG LGHFEFFQLA EDIGAAPVWV 360 FNNGISHNDQ VETENVKPFV QEAIDGIEFA RGDPQSTWGS VRAAMGHPEP FELKYVAVGN 420 EDCFKSYYRG NYLEFYDAIK KAYPDIKIIS NCDASFKPLD HPADYFDYHI YTLAKDLFSR 480 SHDFDNTPRN GPKAFVSEYA VNKTDANNGN LLAALGEAAF LLGLEKNSDI VGMVSYAPLF 540 VNTNDKRWIP DAIVFNSSHL YGTPSYWVQQ FFTESSGATL LNSTLKGNSF SIEASAISFQ 600 ANGKTYIQIK AVNFGEESVN LKVTVTGLIA KFYGSKKKVL TSANVMDENS FSTPEMIVPQ 660 ESLLEMTEEE DLMFVLPPHS FSSFDLLKQS ENIIKMPI* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.0002 | 563 | 682 | 132 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 1.0e-25 | 282 | 421 | 140 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 1.0e-34 | 526 | 680 | 164 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-42 | 526 | 680 | 162 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD40132.1 | 0 | 124 | 698 | 1 | 511 | AF149413_13 contains similarity to arabinosidase [Arabidopsis thaliana] |
| GenBank | AAK50089.1 | 0 | 4 | 698 | 5 | 666 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
| GenBank | AAO92261.1 | 0 | 4 | 698 | 5 | 666 | alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| RefSeq | NP_187685.1 | 0 | 4 | 698 | 5 | 666 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_197984.2 | 0 | 1 | 698 | 3 | 664 | ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 1e-16 | 276 | 684 | 45 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 1e-16 | 276 | 684 | 45 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 1e-16 | 276 | 684 | 45 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 1e-16 | 276 | 684 | 45 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 1e-16 | 276 | 684 | 45 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
