CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID489476
FamilyCBM20
Protein PropertiesLength: 1194 Molecular Weight: 130963 Isoelectric Point: 6.1975
ChromosomeChromosome/Scaffold: 6 Start: 12020131 End: 12026129
Descriptioncatalytics;carbohydrate kinases;phosphoglucan, water dikinases
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM20721561.3e-21
  KVKLNVRLDYQVKFGEHVAMFGSAKEIGSWKKKSPLNWTENGWVCELELDGGQVLEYKFVIVKDDGSLSWESGDNRVLKVPNSGN
Full Sequence
Protein Sequence     Length: 1194     Download
MESIGSHCCS SPFTFITRNT SSLPKLVNFT RRVNLSHQSH RLRNSSSRLT CTATSSSTIE    60
EQRKKKDGSG TKVKLNVRLD YQVKFGEHVA MFGSAKEIGS WKKKSPLNWT ENGWVCELEL    120
DGGQVLEYKF VIVKDDGSLS WESGDNRVLK VPNSGNFSVV CHWDATRETL DLPQEVGIDD    180
GGGGDERDNH DVGDERVMGS ENGAQLQKST LGGQWQGKDA SFMRSNDHGN REVGRNWDTT    240
GLEGTALKMV EGDRNSKNWW RKLEMVREVI VGSVEKEERL KALIYSSIYL KWINTGQIPC    300
FEDGGHHRPN RHAEISRLIF RELEQICSKK DATAEEVLVA RKIHPCLPSF KAEFTAAVPL    360
TRIRDIAHRN DIPHDLKQEI KHTIQNKLHR NAGPEDLIAT EAMLQRITET PGKYSGDFVE    420
QFKIFHNELK DFFNAGSLTE QLDSMKISMD DRGLSALNLF FECKKRLDAS GESSNVLELI    480
KTMHSLASLR ETIIKELNSG LRNDAPDTAI AMRQKWRLCE IGLEDYFFVL LSRFLNALET    540
MGGADQLAKD VGSRNVSSWN DPLDALVLGV HQVGLSGWKQ EECLAIGNEL LAWRERDLLE    600
KEGEEDGKKI WAMRLKATLD RARRLTAEYS DLLLQIFPPN VEILGKALGI PENSVKTYTE    660
AEIRAGIIFQ ISKLCTVLLK AVRNSLGSEG WDVVVPGSTS GTLVQVESIV PGSLPSTGGG    720
PIILLVNKAD GDEEVSAANG NIAGVMLLQE LPHLSHLGVR ARQEKIVFVT CDDDDKVADI    780
RRLVGKFVRL EASPSYVNLI LSTEGKSRTS KSSANKKTDK NSLSKKKTDK KSLSTDDEES    840
KPGSSSSSSL LYSSKDIPSG GIIALADADV PTSGSKSAAC GLLSSLAEAS SKVHSEHGVP    900
ASFKVPTGVV IPFGSMELAL KQSNSEEKFA SLLEKLETAR PEGGELDDIC DQIHEVMKTL    960
QVPKETINSI SKAFPKDARL IVRSSANVED LAGMSAAGLY ESIPNVSPSD PLVFSNSVCQ    1020
VWASLYTRRA VLSRRAAGIS QREASMAVLV QEMLSPDLSF VLHTVSPADP DSNLVEAEIA    1080
PGLGETLASG TRGTPWRLAS GKLDGIVQTL AFANFSEELL VSGTGPADGK YVRLTVDYSK    1140
KRLTVDSVFR QQLGQRLGSV GFFLERNFGC AQDVEGCLVG EDVYIVQSRP QPL*          1200
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR01418PEP_synth7.0e-258691191346+
cd05467CBM203.0e-257216398+
PRK06241PRK062413.0e-389011190296+
cd05818CBM20_water_dikinase2.0e-547216392+
pfam01326PPDK_N9.0e-568671191329+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0005975carbohydrate metabolic process
GO:0016301kinase activity
GO:0016310phosphorylation
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2ols_A0.00000003869119316338A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis
PDB2vn7_A0.000000671152495583A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis
PDB2vn4_A0.000000671152495583A Chain A, Glycoside Hydrolase Family 15 Glucoamylase From Hypocrea Jecorina
PDB1kum_A0.000003711675108A Chain A, Glycoside Hydrolase Family 15 Glucoamylase From Hypocrea Jecorina
PDB1kul_A0.000003711675108A Chain A, Glycoside Hydrolase Family 15 Glucoamylase From Hypocrea Jecorina
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_045_00042.3Aquca_045_00042.2Aquca_045_00042.1Aquca_009_00054.3.18.103
Arabidopsis lyrata486949
Arabidopsis thalianaAT5G01260.2AT5G01260.1AT5G26570.2AT5G26570.1
Brachypodium distachyonBradi2g55380.3Bradi2g55380.2Bradi2g55380.1
Brassica rapaBra005693
Carica papayaevm.model.supercontig_112.34evm.model.supercontig_163.14
Capsella rubellaCarubv10001501mCarubv10001111mCarubv10000070m
Chlamydomonas reinhardtiiCre17.g719900.t1.2Cre17.g703000.t1.3Cre06.g269650.t1.2Cre12.g551200.t1.2g10103.t1
Cre02.g091750.t2.1Cre02.g091750.t1.2Cre02.g091750.t3.1Cre12.g492750.t1.3.499.578Cre12.g492750.t1.3.499.578
Cre09.g415600.t2.1Cre09.g415600.t1.3Cre12.g492750.t1.3.218.305Cre12.g492750.t1.3.218.305Cre10.g450500.t1.2
Citrus clementinaCiclev10011625mCiclev10011624mCiclev10011524mCiclev10011409mCiclev10005295m
Ciclev10005277mCiclev10004968mCiclev10010989m.24.109
Citrus sinensisorange1.1g012444morange1.1g012471morange1.1g015140morange1.1g002052m.24.109orange1.1g002050m.24.109
orange1.1g002027m.24.109
Cucumis sativusCucsa.176290.3Cucsa.176290.1
Eucalyptus grandisEucgr.K02988.2Eucgr.K02988.1Eucgr.K01679.1.16.104
Fragaria vescamrna18850.1-v1.0-hybrid
Glycine maxGlyma03g08980.1Glyma07g17931.1Glyma03g08820.1Glyma03g08930.1Glyma18g42781.1
Glyma03g08910.2Glyma1061s50.2Glyma1061s50.1Glyma03g08850.2Glyma03g08850.1
Glyma0165s00200.1Glyma01g28520.2Glyma01g28520.1Glyma03g08860.1Glyma03g08893.1
Glyma19g30580.1.16.102Glyma03g27600.1.16.103
Gossypium raimondiiGorai.006G181700.3Gorai.006G181700.2Gorai.006G181700.1Gorai.007G379100.3Gorai.007G379100.2
Gorai.007G379100.1Gorai.011G147600.3Gorai.011G147600.2Gorai.011G147600.1Gorai.010G128900.7.16.102
Gorai.010G128900.6.16.102
Linum usitatissimumLus10004826Lus10002495Lus10027767Lus10035528Lus10018226
Lus10041275Lus10031010.16.103Lus10035408.16.103
Malus domesticaMDP0000179937MDP0000520902MDP0000218204MDP0000256086MDP0000293128
MDP0000162900MDP0000149290.20.108
Manihot esculentacassava4.1_014927mcassava4.1_029798mcassava4.1_001086m.16.100
Medicago truncatulaMedtr4g015550.1Medtr7g088740.1.16.104
Mimulus guttatusmgv1a007499mmgv1a000923m.17.105
Oryza sativaLOC_Os01g63810.2LOC_Os01g63810.1LOC_Os05g37450.1LOC_Os07g46790.1.13.101
Panicum virgatumPavirv00009276mPavirv00009275mPavirv00011172mPavirv00049022mPavirv00069370m.17.104
Pavirv00069369m.17.104Pavirv00069371m.17.105
Physcomitrella patensPp1s127_37V6.1Pp1s103_94V6.2Pp1s103_94V6.1Pp1s49_209V6.2Pp1s49_209V6.1
Phaseolus vulgarisPhvul.010G002900.1Phvul.008G105500.1Phvul.001G117500.1
Picea abiesMA_10436655g0010
Populus trichocarpaPotri.009G044800.2Potri.009G044800.1Potri.016G114500.7Potri.016G114500.4Potri.016G114500.3
Potri.016G114500.2Potri.016G114500.1Potri.006G099200.3Potri.006G099200.2Potri.006G099200.1
Prunus persicappa007150mppa020714mppa000429mppa000782m.16.104
Ricinus communis29681.m00133229701.m00061530045.m000475.16.104
Setaria italicaSi002103mSi022447mSi028900m.11.98Si028839m.11.98Si034110m.17.104
Selaginella moellendorffii438530415024440606
Sorghum bicolorSb03g040350.1Sb09g021950.1Sb02g042100.1.13.100
Thellungiella halophilaThhalv10014134mThhalv10013736mThhalv10003634m
Vitis viniferaGSVIVT01033976001GSVIVT01025810001.16.103
Volvox carteriVocar20005575mVocar20005574mVocar20000733mVocar20001112mVocar20009467m
Vocar20004703m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)