| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 490510 |
| Family | GT4 |
| Protein Properties | Length: 475 Molecular Weight: 53875.5 Isoelectric Point: 8.083 |
| Chromosome | Chromosome/Scaffold: 6 Start: 24772089 End: 24778172 |
| Description | digalactosyl diacylglycerol deficient 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT4 | 227 | 335 | 1.6e-21 |
| EQPFTKGAYYIGKMVWSKGYKELLKLLEKHQKELPELEVDLYGDGEDSEEIKAAARKLELTVNVYPGRDHADSLFHNYKVFLNPSTTDVVCTTTAEALAM GKIVVCANH | |||
| Full Sequence |
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| Protein Sequence Length: 475 Download |
| MTKQQQQQHI AIFTTASIPW LTGTAVNPLF RAAYLANDGD RRVTLVIPWL TLNHQKLVYP 60 NSITFSSPSE HEAYVRHWLE ERVSFPLGFE IRFYPGKFAT DKRSILPVGD ISDAIPDEEA 120 DIAALEEPEH LTWFHHGKKW KTKFNYVIGI VHTNYLEYVK REKQGRVKAF LLKYLNSWVV 180 GIYCHKVIRL SAATQEYPKS IVCNVHGVNP KFLEIGLRKL EQQKLQEQPF TKGAYYIGKM 240 VWSKGYKELL KLLEKHQKEL PELEVDLYGD GEDSEEIKAA ARKLELTVNV YPGRDHADSL 300 FHNYKVFLNP STTDVVCTTT AEALAMGKIV VCANHISNEF FKQFPNCRTY DDGKGFVRAT 360 VKALGEQPLQ LTEQQRHELS WEAATQRFIK ACDLSRLSRA ESNISKKSVF ASSSISMGKN 420 LEDMSAYIHF LASGFEASRT AFGAIPGSLQ PDEELCRDLG LPLNTPSPNT RKQD* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 7.0e-5 | 267 | 390 | 138 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| TIGR00032 | argG | 5.0e-5 | 269 | 393 | 131 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| pfam00534 | Glycos_transf_1 | 4.0e-5 | 269 | 335 | 71 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| PLN02501 | PLN02501 | 9.0e-178 | 7 | 461 | 461 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 5 | 465 | 461 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN80695.1 | 0 | 7 | 460 | 4 | 457 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191964.2 | 0 | 5 | 474 | 4 | 473 | DGD2; UDP-galactosyltransferase/ UDP-glycosyltransferase/ digalactosyldiacylglycerol synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q6DW73 | 0 | 6 | 461 | 3 | 457 | DGDG2_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic |
| RefSeq | XP_002320779.1 | 0 | 6 | 463 | 4 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511814.1 | 0 | 5 | 471 | 3 | 469 | UDP-galactose:MGDG galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.000004 | 228 | 246 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CX109154 | 407 | 55 | 460 | 0 |
| CX195456 | 259 | 130 | 388 | 0 |
| CX195448 | 260 | 135 | 394 | 0 |
| GO850017 | 328 | 5 | 332 | 0 |
| CX109154 | 66 | 6 | 62 | 0.000000000007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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